| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1980 |
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| Symbol | |
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| ID | 5322839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2030877 |
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| End bp | 2031557 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790918 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001327649 |
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| Protein GI | 150397182 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.893627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAGGG AAGATCAAAC GCATTCCGGC TCATCCATCA GTCCTCGTAT CGTGGTGATC
GCCGATCACC AGACGGATCT GGACGAACTG TCGCGCATAA TCGGCGCCGA GCCCGAATGG
CACTTGATTG CAGCCTGCCG AACCGCCGCG GATGCGATCG ATACCCTATC CGCCAATCCA
GTCGATCTCG TTCTCGTCGA CCTAGACCTG ACGGAGATGG ATGACCTGGA GCTCGTTCGA
CGCTTCAGCC GGGAAATGCC CGGTCTATCC TGCGTCATCC TTGCCGCCGA GATGAACGAC
GAAGAGCTTG CCGAAGCGAT GCGGAACGGC GTGGGCGGCG TCGTCCTGAA GGCGCGGGCA
CAGAGCTCTC TTGTCGACTG CATTCGGGCC GTCGTGGCGG GACGCACCTA TCTTGCCGGC
CAAAGCATGA ATTCGGTGGT AAGCCGCATT CGGGAACGGG ATGCCGAACG CCGCGCGGTC
TTGCAAAAGT TGACACCGCG CGAGTTGGAG ATCTCGCGTC TGGCGGCCTC GGGTCTGCGC
AGCCGCGAAA TCGCCGCGAG GCTCGGAATA GCCCCGGGGA CCGTGAAACT CCATCTCCAC
AGCGTGTACG GCAAGCTCAA TTTAACCACC CGTGTGGAGC TCGCCAATCT TGCTCAACGA
CTGCAGCTAG GACACGGCTG A
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| Protein sequence | MDREDQTHSG SSISPRIVVI ADHQTDLDEL SRIIGAEPEW HLIAACRTAA DAIDTLSANP
VDLVLVDLDL TEMDDLELVR RFSREMPGLS CVILAAEMND EELAEAMRNG VGGVVLKARA
QSSLVDCIRA VVAGRTYLAG QSMNSVVSRI RERDAERRAV LQKLTPRELE ISRLAASGLR
SREIAARLGI APGTVKLHLH SVYGKLNLTT RVELANLAQR LQLGHG
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