| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1967 |
|---|
| Symbol | |
|---|
| ID | 5322826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2018225 |
|---|
| End bp | 2019124 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640790905 |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_001327636 |
|---|
| Protein GI | 150397169 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.15745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.449635 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACA CCGACATGCC CGTGATCGAC GCGGTTCTCG CCAGGAGACT GATTGCAACA
CAGTTTCCAC AGTGGGCGGA TCTGCCCGTA AGGCCGGTCG AGTTCGGCGG GTGGGATAAC
AGAACCTTTC GCCTCGGTAA GCACATGACC GTGCGACTAC CAAGCGCCGC TCACTACGCG
CTCCAGGTGG AAAAGGAGCA AGAATGGCTG CCCCGGCTCG CGCCTTCCCT GCCGCTGCCT
GTGCCCGTTC CGCTGGCGAT GGGCAGGCCG GGCGAGGGAT ATCCCTGGCA CTGGTCGGTC
TATGAGTGGC GCCACGGCGA GATCGCCACG CGGGCGCAAA TTGCCGATCT CAGCCGCTTC
GCAACAACAA TCGGCGAATT TCTGGCTGCG CTGCAACGGA TCGACGCCCA GGGCGGCCCG
CCGCCCGGCC AGCACAACTT CTTCCGGGGC GGAGCATTGA CCGTCTATGA CCGCGAAACG
CGCTGGGCGC TCGACGCGCT TGAAGGCAGG ATCGACGTCC ACGCCGCGCG CCTGGTGTGG
GAGGCCGCAC TTGCTTCTGC CTGGGACAGG GCTCCCGTCT GGTTCCATGG CGATGTCGCC
GCCGGCAATC TTTTGGTTGA GAATGGCCGT TTGAGCGCCG TGATCGATTT CGGAACGTCG
GGCGTGGGCG ATCCGGCTTG TGATCTGTCG ATCGCCTGGA CGATGTTCGA GGAGACGAGT
CGTACCGCAT TCCGTGCCGC TCTCCGGCTC GACGAAGGGA CCTGGGCGCG TGGCCGAGGA
TGGACGTTGT GGAAGGCGCT GATCGTCGCT GCCGAGATGC CGGGCACCGA TCGACGGGAG
GTTGAAAAGT CGCGGCGGAT CATCGACGCC GTTCTGTCGG ATCACCGCCG CTACGCATAA
|
|---|
| Protein sequence | MSDTDMPVID AVLARRLIAT QFPQWADLPV RPVEFGGWDN RTFRLGKHMT VRLPSAAHYA
LQVEKEQEWL PRLAPSLPLP VPVPLAMGRP GEGYPWHWSV YEWRHGEIAT RAQIADLSRF
ATTIGEFLAA LQRIDAQGGP PPGQHNFFRG GALTVYDRET RWALDALEGR IDVHAARLVW
EAALASAWDR APVWFHGDVA AGNLLVENGR LSAVIDFGTS GVGDPACDLS IAWTMFEETS
RTAFRAALRL DEGTWARGRG WTLWKALIVA AEMPGTDRRE VEKSRRIIDA VLSDHRRYA
|
|---|
| |