| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1964 |
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| Symbol | |
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| ID | 5322823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2015580 |
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| End bp | 2016170 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790902 |
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| Product | transglutaminase family protein cysteine peptidase BTLCP |
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| Protein accession | YP_001327633 |
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| Protein GI | 150397166 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3672] Predicted periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.491162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.52328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGTCG TTGGAGAACG CCTCGTGAAA CGCTTCATTG CGCAGACAGT CTTTTTGTTG
CTTATTGGAG CCCCGGGGGC TGCAGATGCC GGTACAACCA TGAGGACTTC CGGCAAGGCT
TTCGCACCGC CCGCCTTCGC ATCTTTCTGC GTCCGCGAGC CACGCCTCTG CAGCACAGGC
GGCGGCGAAA AGGCGGTCGT TCTTGCTCCG GATAAAATCA GCCAGCTCAA ACAGATCAAC
AGCGCCGTCA ATGCGAGCAT CCGCGAACGC AGCGACCGCG CAAACGTCGG CAAGGACGAT
GACTGGCGCG TGCCGACCGC TTACGGAGAC TGCGAGGACT TCGCAATCCT CAAGAAGCGA
GAGCTGTTGA AGCGCGGCTG GCCCGCATCG GCACTGCTAC TCACGGTTGC GCTCTTTCGT
GGGGAGGGCC ACACGGTTCT CACCGTCCGC ACGAGCGAAG GTGACCTGGT TCTCGACAAC
AGGACCAATT CGGTCAGAGA TTGGTCACGC ACCCCTTATA ATTATTTCGC CCGGCAATCC
CAGTCGAACG GCAGGCGGTG GGAACTGATC GCAGGTGCCC GAAATATCTG A
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| Protein sequence | MPVVGERLVK RFIAQTVFLL LIGAPGAADA GTTMRTSGKA FAPPAFASFC VREPRLCSTG
GGEKAVVLAP DKISQLKQIN SAVNASIRER SDRANVGKDD DWRVPTAYGD CEDFAILKKR
ELLKRGWPAS ALLLTVALFR GEGHTVLTVR TSEGDLVLDN RTNSVRDWSR TPYNYFARQS
QSNGRRWELI AGARNI
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