| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1962 |
|---|
| Symbol | |
|---|
| ID | 5322821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2013432 |
|---|
| End bp | 2014451 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640790900 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_001327631 |
|---|
| Protein GI | 150397164 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.971323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.40215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCT ATTACGATCG TGATGCCGAT CTCAACCTCA TCAAGTCGAA GAAGGTCGCC
ATCATCGGCT ACGGCAGCCA AGGCCGCGCC CATGCGCTGA ACCTCAAGGA TTCCGGAGCG
CAGAACGTCG CCATCGCGCT GAAGTCGGGT TCAGCTACGG CAAAGAAGGC CGAAGCGGAT
GGTTTCAAGG TCATGACGGT TGCCGAAGCT GCGGCCTGGG CCGACCTGAT GATGATGGCA
ACGCCGGACG AACTGCAGGC CGATATCTAC AAGGCCGAAA TCGCCGGCAA TATCCGCGAC
GGCGCAGCGA TCGCCTTTGC GCACGGCCTG AACGTGCATT TCGGCCTGAT CGAGCCGAAG
GCTTCGGTCG ATGTCGTGAT GATCGCCCCG AAAGGCCCGG GCCATACGGT TCGCGGCGAA
TACCAGAAGG GCGGCGGCGT TCCCTGCCTT GTTGCCGTTC ATCAGGATGC TTCCGGCAAT
GCACTCGACC TCGCGCTCTC CTATGCCTGC GGCGTCGGCG GCGGCCGCTC GGGCATCATC
GAAACCAACT TCAAGGAAGA ATGCGAAACC GACCTCTTCG GTGAGCAGGT CGTTCTCTGC
GGCGGTCTGG TCGAGCTTAT CCGGGCTGGT TTCGAAACGC TGGTCGAGGC CGGCTATGCG
CCGGAGATGG CCTATTTCGA GTGCCTGCAC GAAGTCAAGC TGATCGTCGA CCTGATCTAT
GAAGGCGGCA TTGCCAACAT GAACTACTCG ATCTCCAACA CGGCCGAGTG GGGCGAATAC
GTCACCGGTC CGCGCATCAT CACCGAAGAA ACCAAGGCCG AGATGAAGCG CGTGCTGAAG
GACATCCAGA CCGGCAAGTT CACCTCGGAA TGGATGCAGG AGTACCGCTC CGGTGCTGCT
CGCTTCAAGG GCATTCGTCG CGTCAACGAC GCCCATCAGA TCGAGGAAGT CGGCGCCAAG
CTGCGCGGAA TGATGCCCTG GATCGGCAAG AACAAGCTGG TCGACAAGGC GAAGAACTAA
|
|---|
| Protein sequence | MRVYYDRDAD LNLIKSKKVA IIGYGSQGRA HALNLKDSGA QNVAIALKSG SATAKKAEAD
GFKVMTVAEA AAWADLMMMA TPDELQADIY KAEIAGNIRD GAAIAFAHGL NVHFGLIEPK
ASVDVVMIAP KGPGHTVRGE YQKGGGVPCL VAVHQDASGN ALDLALSYAC GVGGGRSGII
ETNFKEECET DLFGEQVVLC GGLVELIRAG FETLVEAGYA PEMAYFECLH EVKLIVDLIY
EGGIANMNYS ISNTAEWGEY VTGPRIITEE TKAEMKRVLK DIQTGKFTSE WMQEYRSGAA
RFKGIRRVND AHQIEEVGAK LRGMMPWIGK NKLVDKAKN
|
|---|
| |