Gene Smed_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1958 
Symbol 
ID5322817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2010166 
End bp2010855 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content59% 
IMG OID640790896 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001327627 
Protein GI150397160 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.160415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.267267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA GCCAGGAGTT CCCGAAGATA TCTGTCGGCC GCCGCAAATT TGGAAAGGCG 
CTGCTTCTCC TCGGTTTTTG CCTTATTCCG CTTGCAGCGC TTGCCCAGAC ACAGATCTAC
GATTCCAAGA CAAAGAAATG GGTGAACTAC GACAAGAGGA AAGCGCGACA GTATTTCTCG
CGAAACAATC AGGTTCCCGA GGCCTTTCGC CGACAGATGG TGCCGTTTCG CACGGCGGAA
GTTCCGGGCA CGATTATCAT CGATGGCAAC CAGCATTTCC TCTATCTGGT CCAGCCGGGT
GGTCAGGCGA TTCGCTACGG CATCGGTGTG GGCCGCGAAG GTTTCGGTTG GGCGGGTATC
GTCCGGGTGG GGCGCAGGGC CGAGTGGCCG ACCTGGACGC CCCCGGCCGA AATGGTCGCA
CGCGATCCGA ATGCGGCAAA ATGGGCAGGC GGCATGCCCG GCGGACCGGA CAATCCGCTG
GGCGCCCGAG CGCTTTACCT TTACGAGGGC GATAGCGATA CGATCTACCG CATCCATGGT
ACGGTGGAGC CCTGGACGAT CGGTCTCGAC GTCTCCTCCG GCTGTATAAG AATGAACAAT
GACAATATCA TCGACCTGTA TTCGCGCGTC GACGTGGGCG CGAAGGTCAT CGTGCTGATG
CAGGGGGCCG CGCTCTACAA GGGCGTGTGA
 
Protein sequence
MTMSQEFPKI SVGRRKFGKA LLLLGFCLIP LAALAQTQIY DSKTKKWVNY DKRKARQYFS 
RNNQVPEAFR RQMVPFRTAE VPGTIIIDGN QHFLYLVQPG GQAIRYGIGV GREGFGWAGI
VRVGRRAEWP TWTPPAEMVA RDPNAAKWAG GMPGGPDNPL GARALYLYEG DSDTIYRIHG
TVEPWTIGLD VSSGCIRMNN DNIIDLYSRV DVGAKVIVLM QGAALYKGV