| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1947 |
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| Symbol | |
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| ID | 5322806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1999984 |
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| End bp | 2001663 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640790885 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001327616 |
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| Protein GI | 150397149 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.495401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.221506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGGG TCGGGGAGCC CGCATGGCTC CTTGCCTTCG TGTGCGGCGC CGTCTTCCTG
CTTTCGGTGC TGCCTCTGAT CCACCTTGGT TGGGCTGGCC TCAAAGGTCT CGAAGGCGGC
GAGGCGGCGA GCGTGCTCCT CGAGGCGGCG ACCTTCGCCG CACTTCGCAA CACACTCGTT
GCTGCCGCGG GCGGCATGGT GATCTCGCTT GTCGTCGGCG CACTCTTCGC CTTCGTGGTG
GCGCTTACGG ACATACGCGG TAAACTTGCC TTGAGCTTCG CCTTCATGCT TCCGATGATG
ATCCCGCCAC AGGTGACGGC CCTAGCCTGG GTGGAGATGT CGGGGCCCTC GAGCCCCTTG
CTCAAGACAT TGGGGCTTGC TCCGCCGCTC GGCAGTCCGC AGCCGCTTTA TTCGCTAGCG
GGCATCGCAC TGCTTCTCGG CGTGCAGCAT GCGCCGCTTG TCTTCCTGGC AATCAAGGCC
GGACTTGCGA CGCATCCGCG CGACGGCGTG GAGGCGGCGC GGCTTTCCGG CGCCTCGCCC
TGGCGCGTCT TCCGCGACAT CGTTCTGCCG CTGGCCTGTC CGGCGCTGAT CGCCGGTGGC
GCCATCGCCT TCATCTCGGG CATCGGGAAT TTCGGCATTC CGGCAATTCT CGGCATTCCC
GCATCGATCG AAACGCTACC GACCTTGATC TTCGCCAAGT TCGCGAGTTT CGGTTCGTCG
ACATTCGGCG AAATTGCCGT GCTTTCGACG ATCATCGCAT CGATTTCCGC GGGAGGGCTG
CTCCTGCAGC AGCGGGCACT CAAGGGCCGG GATTATCGCC TCATCGGCCT TACCGGGGCG
AGGGCCGCCT TCACGCTGGG GCGTTTGCGA ATTGCGGTGG AGACCCTGCT TTGGGGCACC
CTCGCACTGG TGCTCGTCGC GCCGCTCCTG GCGCTTGTCG CAAGTTCACT CGTGCCGGCC
TATGGTGTGC CGCTCACTCT TCACACTGTC TCCCTGCAGG CCTATGGCGA GGTTCTCTTC
CGCCAGACGG TGACGCTGAC GGCGCTGAAG AACTCCGTCT TCCTTGCCTC GGCCGCGGCA
GTCGGCCTTC TTGTGATTGC TCTGCCGGCC GGGTACCTGC TCGCAGCGCG ACGCGGGAGG
GTGGCCAATC TCCTGGCGAT CCTTATCGAA ATTCCCTACG CACTGCCCGG CATCGTGCTC
GCCGTCGCCT TCATCCTTGC CTTCGCGGCA CCGCTGCCGG TGATCGGCGT TTCGATCTAT
GGCACCATCT GGATCATTCT CGCCGCCTAT CTCTCATCCT TCTTCGCCGT GAGCCTTAAG
CCGGTGATGA GCGCCTTCCT GCAGATGGAT CCCTCGCTCG AGGAGGCGGC GCGGCTTGCA
GGCGCAGGCT TCCTGCGCCG CATGCGGGAC GTGCTGCTGC CGCTGGTGGC GCCCGCAGCG
GGTGCCTCTG TCATTCTCGT CTTCCTGATC GCGGCGAACG AGCTGACGGT CTCGGCGCTC
CTCTGGTCCG CAGGCACGCA GACGCTCGGC GTGGCGATCT TCAATCTCGA CGATAGCGGC
TCCTCCAATC TTGCCTCGGC ACTTTCTGTG CTTGTCGTCG CGGTGGTGAT CGGGTTGATG
GCGACGCTCG AAGTCTTGGC GAAATACCTG CCGGAGGGCG TGCTGCCATG GCGCAACTGA
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| Protein sequence | MSGVGEPAWL LAFVCGAVFL LSVLPLIHLG WAGLKGLEGG EAASVLLEAA TFAALRNTLV
AAAGGMVISL VVGALFAFVV ALTDIRGKLA LSFAFMLPMM IPPQVTALAW VEMSGPSSPL
LKTLGLAPPL GSPQPLYSLA GIALLLGVQH APLVFLAIKA GLATHPRDGV EAARLSGASP
WRVFRDIVLP LACPALIAGG AIAFISGIGN FGIPAILGIP ASIETLPTLI FAKFASFGSS
TFGEIAVLST IIASISAGGL LLQQRALKGR DYRLIGLTGA RAAFTLGRLR IAVETLLWGT
LALVLVAPLL ALVASSLVPA YGVPLTLHTV SLQAYGEVLF RQTVTLTALK NSVFLASAAA
VGLLVIALPA GYLLAARRGR VANLLAILIE IPYALPGIVL AVAFILAFAA PLPVIGVSIY
GTIWIILAAY LSSFFAVSLK PVMSAFLQMD PSLEEAARLA GAGFLRRMRD VLLPLVAPAA
GASVILVFLI AANELTVSAL LWSAGTQTLG VAIFNLDDSG SSNLASALSV LVVAVVIGLM
ATLEVLAKYL PEGVLPWRN
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