Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1938 |
Symbol | |
ID | 5322797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1989467 |
End bp | 1989847 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640790876 |
Product | putative signal peptide protein |
Protein accession | YP_001327607 |
Protein GI | 150397140 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.608545 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGCCG CGACGTTCTG CCTGCATATG AGAAGGCTGA TGCGCGACAG GGAAGGCAAC TTCGCCGTTC TGGGCGCTAT CGCATTCATT CCGATCATCG GCGCGGCTGC CCTGGCGATC GACTTCGCCG GGGCCTACTT CGAAGCGGAG AAGATCCAGA GCGCCCTCGA TGCGGCGGCG CTCGGTTCGG TCCGGGCTTA TGGCGAGGGC GCCACCGAGG AGGAAGCCTA TGATGCGGCC CAAAAATTCT TCTGGAGCAA CTACGCGCTG CCTCAGGAAA GCGTCGTCGA CGCCCTGAGT GCTGCAACGG AAGCTTCCAC GCAGGCGCTT CCCCGATGCT GCCGAACTCC AATATGCGGG CAATGGTGCG ACCAGCGGTG A
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Protein sequence | MRAATFCLHM RRLMRDREGN FAVLGAIAFI PIIGAAALAI DFAGAYFEAE KIQSALDAAA LGSVRAYGEG ATEEEAYDAA QKFFWSNYAL PQESVVDALS AATEASTQAL PRCCRTPICG QWCDQR
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