| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1932 |
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| Symbol | |
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| ID | 5322791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1985080 |
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| End bp | 1985997 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790870 |
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| Product | PhzF family phenazine biosynthesis protein |
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| Protein accession | YP_001327601 |
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| Protein GI | 150397134 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
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| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.580884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGGC GCTACGCGAT TTACGATGTC TTCACCGAGA AGCGTCTAGC GGGAAATCCT
CTCGCGGTGG TGTTCGATGC CGATGGACTG ACCGAAGAAG CCATGCAGGC TATCGCTCAG
GAGTTCAACC TATCCGAAAC CGTCTTCCTC CTGCGGCCCG AAAGCGCCGC CCATTCCGCT
CGCCTTCGGA TATTCACCCC GGCACATGAA CTGCCCTTTG CGGGACACCC GACCGTAGGA
GCGGCTGTTG CCATCGCCGA AACGGCCTAT GGTGATGCCA ACAGCGCGCT CGAGCTGATG
CAGGTGCTGG AAGAAAGCGT TGGGCCGGTC CGCGCGGTCG TCAGACTTAA ACCGGGTTCG
GCGACCTTCG CGGAGTTCGA CCTGCCGCGC AAACCGAGCC GGCTTGAGGC GCAGTTCGAC
CGGCAGGAGA TCGCCGATGC ACTTGCGCTC AAGGCGACGC AGGTCGGCTT CGAAAATCAT
GTACCGTCTT TCTGGAGTGC CGGCGTTCCG TTCGTGATGG TGCCCCTTCA CGATATTCGC
TCGGTGGCGT CTGTGGAGTT CGATCCGCAG CGTTGGGAAC ACCTGGCGCC GCTTGCCGAA
GGACGGCTTG CCGCTGCCTA TCTCTACTGT CGCGGCGGCA TCAATCACAT GGCCCGTTTT
CATACCCGGA TGTTCGCTCC GGGCATGGGG CTCGTCGAGG ATCCGGCGAC CGGTTCGGCT
GCGGCCGCCC TTTCGGGCGC CGTCAATTTT TTCGACGGCC TGGTCGACGG CCACCATCCC
ATGCTGATCG AGCAGGGCGT GGAAATGGGC CGTCCTTCGA TTATTCACCT GCATCTGAAT
ATTGCGGAGG GGAAAATCGC GAGTGCGCGG ATCGGTGGCC ATGCGGTAAA ACTTGCCGAG
GGCGAGCTGG CGGTCTGA
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| Protein sequence | MARRYAIYDV FTEKRLAGNP LAVVFDADGL TEEAMQAIAQ EFNLSETVFL LRPESAAHSA
RLRIFTPAHE LPFAGHPTVG AAVAIAETAY GDANSALELM QVLEESVGPV RAVVRLKPGS
ATFAEFDLPR KPSRLEAQFD RQEIADALAL KATQVGFENH VPSFWSAGVP FVMVPLHDIR
SVASVEFDPQ RWEHLAPLAE GRLAAAYLYC RGGINHMARF HTRMFAPGMG LVEDPATGSA
AAALSGAVNF FDGLVDGHHP MLIEQGVEMG RPSIIHLHLN IAEGKIASAR IGGHAVKLAE
GELAV
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