Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1927 |
Symbol | |
ID | 5322785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1981939 |
End bp | 1982679 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640790864 |
Product | hypothetical protein |
Protein accession | YP_001327596 |
Protein GI | 150397129 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0019532 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTCT CAGACTTGAT CCTTGGTCAC CTTCGGCGGA ACCCGGCCAG TGTGATGAAC GGGGTTGTCC TTGCCAGCAC CTTCCGTCGG GTTCTCCCGC TTTTCGGACT GGCCGCTTCG CGCCGGCGGC ACATCGGCGC CCTCGCTACC AGACTCGTCC GCCTGGTCTG GCAATGGCAC CGGTTCGAAG TCCATATCCG GAGGCGTCGT CGTCTGCCGG TTCTTGTGGT CTTTGGGATC GATCATGGTC GGAGTCCTTT CGCATCGCGG TTTCAACCAA CCGCGTTCAG TAAGGTTCCA CTCAACGGGG GGGGCCGCGT GATGGCCTAC CGCATCGCCA ACTCCGTTCG TCCCGATCCG ACACCAAAGC GGAAGCCGAC GAAGAACAAA GATTACCTCG CGTTCATCCA CGAGCTGCCG TGCTGCGTAT CAGGCCGCTA CGGCGTCGAG GCTGCGCACC TGTCTTGCGC GGCTCCCCGA TTTGGTCATT ACGGTCGTGG CAAAGGCAGC AAGGTTTCCG ACCGCTGGGT TCTGCCTCTT CATCCGGACG AGCACCGCCG CCAGCACGGC ATGAGCGAAG AGCGGTTCTG GCGCGCGGCC CGCATCAACC CGCACGTGCT CGCCCTCACC ATACACGGCC TCTGGACTGA TATGGGCGAG GATGCGGCGC CCTTCGCAAC TGCTATCATC AATCAGACGT TGGCCGACGC CGGCGCGCTC CGGTCGAGGG ACGAGGTATG A
|
Protein sequence | MSVSDLILGH LRRNPASVMN GVVLASTFRR VLPLFGLAAS RRRHIGALAT RLVRLVWQWH RFEVHIRRRR RLPVLVVFGI DHGRSPFASR FQPTAFSKVP LNGGGRVMAY RIANSVRPDP TPKRKPTKNK DYLAFIHELP CCVSGRYGVE AAHLSCAAPR FGHYGRGKGS KVSDRWVLPL HPDEHRRQHG MSEERFWRAA RINPHVLALT IHGLWTDMGE DAAPFATAII NQTLADAGAL RSRDEV
|
| |