Gene Smed_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1927 
Symbol 
ID5322785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1981939 
End bp1982679 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content63% 
IMG OID640790864 
Producthypothetical protein 
Protein accessionYP_001327596 
Protein GI150397129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0019532 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCT CAGACTTGAT CCTTGGTCAC CTTCGGCGGA ACCCGGCCAG TGTGATGAAC 
GGGGTTGTCC TTGCCAGCAC CTTCCGTCGG GTTCTCCCGC TTTTCGGACT GGCCGCTTCG
CGCCGGCGGC ACATCGGCGC CCTCGCTACC AGACTCGTCC GCCTGGTCTG GCAATGGCAC
CGGTTCGAAG TCCATATCCG GAGGCGTCGT CGTCTGCCGG TTCTTGTGGT CTTTGGGATC
GATCATGGTC GGAGTCCTTT CGCATCGCGG TTTCAACCAA CCGCGTTCAG TAAGGTTCCA
CTCAACGGGG GGGGCCGCGT GATGGCCTAC CGCATCGCCA ACTCCGTTCG TCCCGATCCG
ACACCAAAGC GGAAGCCGAC GAAGAACAAA GATTACCTCG CGTTCATCCA CGAGCTGCCG
TGCTGCGTAT CAGGCCGCTA CGGCGTCGAG GCTGCGCACC TGTCTTGCGC GGCTCCCCGA
TTTGGTCATT ACGGTCGTGG CAAAGGCAGC AAGGTTTCCG ACCGCTGGGT TCTGCCTCTT
CATCCGGACG AGCACCGCCG CCAGCACGGC ATGAGCGAAG AGCGGTTCTG GCGCGCGGCC
CGCATCAACC CGCACGTGCT CGCCCTCACC ATACACGGCC TCTGGACTGA TATGGGCGAG
GATGCGGCGC CCTTCGCAAC TGCTATCATC AATCAGACGT TGGCCGACGC CGGCGCGCTC
CGGTCGAGGG ACGAGGTATG A
 
Protein sequence
MSVSDLILGH LRRNPASVMN GVVLASTFRR VLPLFGLAAS RRRHIGALAT RLVRLVWQWH 
RFEVHIRRRR RLPVLVVFGI DHGRSPFASR FQPTAFSKVP LNGGGRVMAY RIANSVRPDP
TPKRKPTKNK DYLAFIHELP CCVSGRYGVE AAHLSCAAPR FGHYGRGKGS KVSDRWVLPL
HPDEHRRQHG MSEERFWRAA RINPHVLALT IHGLWTDMGE DAAPFATAII NQTLADAGAL
RSRDEV