Gene Smed_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1921 
Symbol 
ID5322779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1978160 
End bp1978906 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content61% 
IMG OID640790858 
Productphage Gp37Gp68 family protein 
Protein accessionYP_001327590 
Protein GI150397123 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.209387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CATCGATCGA ATGGACTGAT GCAACGTGGA ATCCCGTAGC CGGCTGCTCG 
ATAATGAGTG CGGGGTGCAC CAACTGCTAC GCGATGCGTA TGGCGGCGCG CCTTGAAGCC
ATGGGGCTCG AGAAGTACCG AGGCCTGACA CGCAAGAGCG GCGGTCGAGC GAAATGGACG
GGCGACCTCT ATCTCGACGA GAGCGCGCTT TCTGTGCCAT CGACCTGGTC AAAGCCACGG
AATGTATTCG TCAACTCGAT GTCCGACCTA TTTCACCCAG ACGTGCCGGT GGAGTTCATC
CGAAAAGTGT GGCGGGCAAT GGCTGATACG CGGCGCCACA CATACCAGAT CCTCACCAAG
CGGCCGGATC GCATGGCGTA TATCCTGCGC GACGGTTTCG ATGTTCTGCC GAATGTCTGG
CTTGGCTCCA GCGTAGAAGA CGGGCGTGTG ATCGATCGCC TCGACGAGCT TCGCCGAGTG
CCTGCCGCAA TTCGCTTCGT CTCGTTTGAA CCGCTCATCG GCTCCGTTGC CGCGGGCCGA
CTGGATGGCA TCGACTGGGC TATTGTCGGC GGCGAATCTG GCCCGAAGGC GCGGCCCATG
GATCCGGTAT GGATCGACGA GGTTTTCGAA ATGTGCTCGG AGGCGGGCTC TGCCTTCTTC
TTCAAGCAAT GGGGCGGCAG GAACAAGAAA GCGACGGGGC GTTCCTATCG CGGACGCACC
TGGGACGCGA TGCCCGCGAC CGCTTAA
 
Protein sequence
MAETSIEWTD ATWNPVAGCS IMSAGCTNCY AMRMAARLEA MGLEKYRGLT RKSGGRAKWT 
GDLYLDESAL SVPSTWSKPR NVFVNSMSDL FHPDVPVEFI RKVWRAMADT RRHTYQILTK
RPDRMAYILR DGFDVLPNVW LGSSVEDGRV IDRLDELRRV PAAIRFVSFE PLIGSVAAGR
LDGIDWAIVG GESGPKARPM DPVWIDEVFE MCSEAGSAFF FKQWGGRNKK ATGRSYRGRT
WDAMPATA