Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1916 |
Symbol | |
ID | 5322774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1975071 |
End bp | 1975880 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640790853 |
Product | hypothetical protein |
Protein accession | YP_001327585 |
Protein GI | 150397118 |
COG category | [S] Function unknown |
COG ID | [COG3750] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.863299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCG ACGCCCAGAT CAGAGCCTTC ATCGACCGCA TCCTTCGCTT GAAGGAAGAG CAGGACACGA TCGGCGAGGA CATCCGCGAC ATCTACGCGG AAGCAAAGTC CATGGGGTTC GACAAGACCG CAATGGGTCA GGTTGTCCAG CTGATCCGCA AGCGCGGCAA GATCGGCGAA GATGCGTTCA GCGAGCAGAA CGCGATCGTC GAACTCTATC TCTCTGCATA CGAGGGTCCG GCCTTGGTCC TGGCCGCTGC TGTGTCCTCG CACACGCCAG CGCCCGCCCG CGCACGAGAA AACATTGAAC AATTTCCGAA ATCGGACGGC GGCGAAGTCG CTGCAGTGAA GGGCCATGCC CGACTGGCGA ACGCCGCTGG CGTTGAACCG CCGCCGTCCG AGCAGTTCGA CCCCGAAACG GGCGAGATCA TCGAAGAGAT CGCAACGAGC GCAGGAGGCG AAAGTGAAGA AGTAGCCAAA AACGCCGTCG CAAGCGCGTC TGGCCCGGAC GTAAAACGGG CATCCCATTC GCCTGAAGAG GCAAACGGGA TGGACCGCGA CGTGCTTCGA GGCGACGAGA TCGCCCAAGC CGTGCCAGCG GAAAACGCCC GTAAGGCAGT CCCGGAAACG GAAGACGGTA GCGTGAGCCA TGCTGGAGCC GGTGAAAGCC CGGCCGCCAA CTCCATCACC AAGCCGAAAT CCGCCCTCCG GCCCAATTGC CGGAACCCTG AAGCGTGCGG CGGCTACGGT GCGAACCATT GTCATTCTTG CCGGAAGGCT ATGCGCGAGA AGGCGGAGGA AGTCGCATGA
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Protein sequence | MTSDAQIRAF IDRILRLKEE QDTIGEDIRD IYAEAKSMGF DKTAMGQVVQ LIRKRGKIGE DAFSEQNAIV ELYLSAYEGP ALVLAAAVSS HTPAPARARE NIEQFPKSDG GEVAAVKGHA RLANAAGVEP PPSEQFDPET GEIIEEIATS AGGESEEVAK NAVASASGPD VKRASHSPEE ANGMDRDVLR GDEIAQAVPA ENARKAVPET EDGSVSHAGA GESPAANSIT KPKSALRPNC RNPEACGGYG ANHCHSCRKA MREKAEEVA
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