Gene Smed_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1916 
Symbol 
ID5322774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1975071 
End bp1975880 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content62% 
IMG OID640790853 
Producthypothetical protein 
Protein accessionYP_001327585 
Protein GI150397118 
COG category[S] Function unknown 
COG ID[COG3750] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.863299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCG ACGCCCAGAT CAGAGCCTTC ATCGACCGCA TCCTTCGCTT GAAGGAAGAG 
CAGGACACGA TCGGCGAGGA CATCCGCGAC ATCTACGCGG AAGCAAAGTC CATGGGGTTC
GACAAGACCG CAATGGGTCA GGTTGTCCAG CTGATCCGCA AGCGCGGCAA GATCGGCGAA
GATGCGTTCA GCGAGCAGAA CGCGATCGTC GAACTCTATC TCTCTGCATA CGAGGGTCCG
GCCTTGGTCC TGGCCGCTGC TGTGTCCTCG CACACGCCAG CGCCCGCCCG CGCACGAGAA
AACATTGAAC AATTTCCGAA ATCGGACGGC GGCGAAGTCG CTGCAGTGAA GGGCCATGCC
CGACTGGCGA ACGCCGCTGG CGTTGAACCG CCGCCGTCCG AGCAGTTCGA CCCCGAAACG
GGCGAGATCA TCGAAGAGAT CGCAACGAGC GCAGGAGGCG AAAGTGAAGA AGTAGCCAAA
AACGCCGTCG CAAGCGCGTC TGGCCCGGAC GTAAAACGGG CATCCCATTC GCCTGAAGAG
GCAAACGGGA TGGACCGCGA CGTGCTTCGA GGCGACGAGA TCGCCCAAGC CGTGCCAGCG
GAAAACGCCC GTAAGGCAGT CCCGGAAACG GAAGACGGTA GCGTGAGCCA TGCTGGAGCC
GGTGAAAGCC CGGCCGCCAA CTCCATCACC AAGCCGAAAT CCGCCCTCCG GCCCAATTGC
CGGAACCCTG AAGCGTGCGG CGGCTACGGT GCGAACCATT GTCATTCTTG CCGGAAGGCT
ATGCGCGAGA AGGCGGAGGA AGTCGCATGA
 
Protein sequence
MTSDAQIRAF IDRILRLKEE QDTIGEDIRD IYAEAKSMGF DKTAMGQVVQ LIRKRGKIGE 
DAFSEQNAIV ELYLSAYEGP ALVLAAAVSS HTPAPARARE NIEQFPKSDG GEVAAVKGHA
RLANAAGVEP PPSEQFDPET GEIIEEIATS AGGESEEVAK NAVASASGPD VKRASHSPEE
ANGMDRDVLR GDEIAQAVPA ENARKAVPET EDGSVSHAGA GESPAANSIT KPKSALRPNC
RNPEACGGYG ANHCHSCRKA MREKAEEVA