Gene Smed_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1906 
Symbol 
ID5322764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1969951 
End bp1970505 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content64% 
IMG OID640790843 
Producthypothetical protein 
Protein accessionYP_001327575 
Protein GI150397108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.178268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCAGCC TCGAAGTTAT GCAGGCAGCC GGGATGAGCA TTCCCTCCGG TATTGACCCG 
AACAAGCTCG ACGCGGTGTA CGGCTACGCC CTCGAAGGCG TTCCGAACTG CGGCTTAGCG
ATCGCCACGC AGAAGCTGAT CAAGGGCGAC TATGCCGGCA ACCCCGATAT TCTTCTCGGC
ATGATCCCGA AGCCGCCGAT CCTTGCCGCT CTGGCGAAGG CGGAATCTAG ACTTGCCCGT
GAAGATCTAG CGAGGAAACG GGAGATCGCC GCCACGCTCA CCCACCAGCC GCCAGAGATC
GACCGGTCTC CGGAGGTCAT GGCCCGCGTC CGCGCCCGGT TGAACCAATT CAAGCAGGAG
CATGCTGCGT CAAAGGCAGC CGCCGGCGGC ATTGTGGTCC AAAAGTCCAT GTCACCCGAG
CGTGCCGAAG AGCTGGCGCG GATACTGGCA TTGCCAGACG CGCGCTCGGT CAGCGCCGAG
CAGATGGCCT ACCGCCGGAA GATCGAGATG GACCTCGACG CCGTCGAGCC GATCGACGAG
GAGCGCGCGG CATGA
 
Protein sequence
MRSLEVMQAA GMSIPSGIDP NKLDAVYGYA LEGVPNCGLA IATQKLIKGD YAGNPDILLG 
MIPKPPILAA LAKAESRLAR EDLARKREIA ATLTHQPPEI DRSPEVMARV RARLNQFKQE
HAASKAAAGG IVVQKSMSPE RAEELARILA LPDARSVSAE QMAYRRKIEM DLDAVEPIDE
ERAA