Gene Smed_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1897 
Symbol 
ID5322755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1964247 
End bp1964747 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content57% 
IMG OID640790834 
Productphage terminase small subunit 
Protein accessionYP_001327566 
Protein GI150397099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.94063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCC TGAAAAACGC ACGGCACGAG AAGTTCGCGC AGGCCCGCGC GAAAGGCAAT 
ACAGTCGATG AGGCGTATGT CGTCGCCGGC TTCAAAGCCA ACAGAGGAAA TGCAGCACGT
TTGAATGCAA ATGAAAGCAT TCAAGAGCGC GTAGCCGAAA TCCAGGGTAA GGGCGCTCTC
AAGGCGGAAG CGACCGTTGA ACGTGTTCTG AAAGAGCTGT CTCGTATCGG CTTCTCCGAT
CTTCGCCGCG TGTTCGATGC GAACGGCAGG CTGCTTCGAC CCGAAGAGTG GGATGATGAC
ACAGCCGCAG CAGTCGCTTC GGTCGAAGTG GTGATCCGCA ACACCGGCGA CGGTGAGGTC
GAGCACGTCC ACAAGATTAA GGTCTGGGAC AAGAACAGCG CCTTGGAGAA GCTCGCCAAG
CACCTCGGTA TGTTCATCGA GCGTGTCGAG CACTCTGGGA GCATGAGCCT CAATGTCTTG
CCAGAGGATG CCGAACTGTG A
 
Protein sequence
MPILKNARHE KFAQARAKGN TVDEAYVVAG FKANRGNAAR LNANESIQER VAEIQGKGAL 
KAEATVERVL KELSRIGFSD LRRVFDANGR LLRPEEWDDD TAAAVASVEV VIRNTGDGEV
EHVHKIKVWD KNSALEKLAK HLGMFIERVE HSGSMSLNVL PEDAEL