Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1897 |
Symbol | |
ID | 5322755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1964247 |
End bp | 1964747 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640790834 |
Product | phage terminase small subunit |
Protein accession | YP_001327566 |
Protein GI | 150397099 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.94063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCATCC TGAAAAACGC ACGGCACGAG AAGTTCGCGC AGGCCCGCGC GAAAGGCAAT ACAGTCGATG AGGCGTATGT CGTCGCCGGC TTCAAAGCCA ACAGAGGAAA TGCAGCACGT TTGAATGCAA ATGAAAGCAT TCAAGAGCGC GTAGCCGAAA TCCAGGGTAA GGGCGCTCTC AAGGCGGAAG CGACCGTTGA ACGTGTTCTG AAAGAGCTGT CTCGTATCGG CTTCTCCGAT CTTCGCCGCG TGTTCGATGC GAACGGCAGG CTGCTTCGAC CCGAAGAGTG GGATGATGAC ACAGCCGCAG CAGTCGCTTC GGTCGAAGTG GTGATCCGCA ACACCGGCGA CGGTGAGGTC GAGCACGTCC ACAAGATTAA GGTCTGGGAC AAGAACAGCG CCTTGGAGAA GCTCGCCAAG CACCTCGGTA TGTTCATCGA GCGTGTCGAG CACTCTGGGA GCATGAGCCT CAATGTCTTG CCAGAGGATG CCGAACTGTG A
|
Protein sequence | MPILKNARHE KFAQARAKGN TVDEAYVVAG FKANRGNAAR LNANESIQER VAEIQGKGAL KAEATVERVL KELSRIGFSD LRRVFDANGR LLRPEEWDDD TAAAVASVEV VIRNTGDGEV EHVHKIKVWD KNSALEKLAK HLGMFIERVE HSGSMSLNVL PEDAEL
|
| |