Gene Smed_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1840 
Symbol 
ID5322698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1918701 
End bp1919042 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content60% 
IMG OID640790778 
Productglutathione-dependent formaldehyde-activating GFA 
Protein accessionYP_001327510 
Protein GI150397043 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.798586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.240936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG GTCATTGCCA TTGCAGGGCG GTCCGCGTCG CGGTCCCCGT CCGCCCCGAG 
ACGCTCGGCG ATTGCAACTG CTCTCTCTGC AGCAGGCTCG GAACGCTTTG GGGTTACTAT
CCGTCAAACG AAGTCGCCGT CACCGATCCG GAAAGAAAGC TGGTCGGATA TGTTCAGGGA
GACAGGACCC TGACTATGCA CCACTGCAGC GTCTGCGGCT GCACCACCCA TTATTCGCCC
ATCGGCGGCA ACACGTCCCG CATGGCGGTT AACATGCGCA TCTTTGATCG TTCGGTCTGG
GAGGACATTC CGCACCGTCT GATCGACGGC GCGAGCTGGT AA
 
Protein sequence
MIEGHCHCRA VRVAVPVRPE TLGDCNCSLC SRLGTLWGYY PSNEVAVTDP ERKLVGYVQG 
DRTLTMHHCS VCGCTTHYSP IGGNTSRMAV NMRIFDRSVW EDIPHRLIDG ASW