Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1835 |
Symbol | |
ID | 5322693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1912911 |
End bp | 1913603 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790773 |
Product | hypothetical protein |
Protein accession | YP_001327505 |
Protein GI | 150397038 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.482692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0657358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAAT ATTTACGCAA CCAAATAGTC CAGAAAATGT TGGGCGAGCC GAAACAATCG CCGGCCCGAA TGCCGCCAGC AAGGCAGGCG GCGGACACCC AGCCATCGAG CGGGAGCGGC CCTTTGGGTG CGGCGGAGGT TGACGCCGCA AACGCGCTCG GAGCCGCATA TTACCAGTAT CCGGGCTATT TCAAGAAGGG ACAGGGGGGG CTCGCCGGAT ACCAACGGGA AAAACTGGCG GCGGAATTTG GATGGTCTCC CGCAGGCATG GGCAAATACG AGGCCGCATT GCGCGCCGGA CCGTTGAACG GCCTTGCGGC ATGGGGGGAT TCTCGAACCG CCAGCGCCGT GGCGCCTGAG TTGAATGTGC CCGAATGCGC TCCGGGCAAC GGTTATGCCC GCGCCAACAA GCGTCCGCAT AACGATTGCC GCGATGCCTT CCGGCACGCT TACTGGAGCG CCTTGATGGC CCAACGCGAC GAGGAGGACG CCGCCATGCT GGGTGACGCC TATGAACGGT CTTCTAAAGG GCCGTATGCC GAAGTCTACA TGGACCTTTA CAACAACAGG GTCGGACGAC GGATCGGCTC GGCCAATAAA GATGCAAGCG GCGAGCAGAT CTTCGACCTA GTCGCCGATG AGCTGGAAAA ACGCCGGCTA ATTACAAGTC CATTTCAGGC ACTAAAACGA TGA
|
Protein sequence | MSEYLRNQIV QKMLGEPKQS PARMPPARQA ADTQPSSGSG PLGAAEVDAA NALGAAYYQY PGYFKKGQGG LAGYQREKLA AEFGWSPAGM GKYEAALRAG PLNGLAAWGD SRTASAVAPE LNVPECAPGN GYARANKRPH NDCRDAFRHA YWSALMAQRD EEDAAMLGDA YERSSKGPYA EVYMDLYNNR VGRRIGSANK DASGEQIFDL VADELEKRRL ITSPFQALKR
|
| |