Gene Smed_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1835 
Symbol 
ID5322693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1912911 
End bp1913603 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID640790773 
Producthypothetical protein 
Protein accessionYP_001327505 
Protein GI150397038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.482692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0657358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT ATTTACGCAA CCAAATAGTC CAGAAAATGT TGGGCGAGCC GAAACAATCG 
CCGGCCCGAA TGCCGCCAGC AAGGCAGGCG GCGGACACCC AGCCATCGAG CGGGAGCGGC
CCTTTGGGTG CGGCGGAGGT TGACGCCGCA AACGCGCTCG GAGCCGCATA TTACCAGTAT
CCGGGCTATT TCAAGAAGGG ACAGGGGGGG CTCGCCGGAT ACCAACGGGA AAAACTGGCG
GCGGAATTTG GATGGTCTCC CGCAGGCATG GGCAAATACG AGGCCGCATT GCGCGCCGGA
CCGTTGAACG GCCTTGCGGC ATGGGGGGAT TCTCGAACCG CCAGCGCCGT GGCGCCTGAG
TTGAATGTGC CCGAATGCGC TCCGGGCAAC GGTTATGCCC GCGCCAACAA GCGTCCGCAT
AACGATTGCC GCGATGCCTT CCGGCACGCT TACTGGAGCG CCTTGATGGC CCAACGCGAC
GAGGAGGACG CCGCCATGCT GGGTGACGCC TATGAACGGT CTTCTAAAGG GCCGTATGCC
GAAGTCTACA TGGACCTTTA CAACAACAGG GTCGGACGAC GGATCGGCTC GGCCAATAAA
GATGCAAGCG GCGAGCAGAT CTTCGACCTA GTCGCCGATG AGCTGGAAAA ACGCCGGCTA
ATTACAAGTC CATTTCAGGC ACTAAAACGA TGA
 
Protein sequence
MSEYLRNQIV QKMLGEPKQS PARMPPARQA ADTQPSSGSG PLGAAEVDAA NALGAAYYQY 
PGYFKKGQGG LAGYQREKLA AEFGWSPAGM GKYEAALRAG PLNGLAAWGD SRTASAVAPE
LNVPECAPGN GYARANKRPH NDCRDAFRHA YWSALMAQRD EEDAAMLGDA YERSSKGPYA
EVYMDLYNNR VGRRIGSANK DASGEQIFDL VADELEKRRL ITSPFQALKR