Gene Smed_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1830 
Symbol 
ID5322688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1909594 
End bp1910589 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content61% 
IMG OID640790768 
Producthypothetical protein 
Protein accessionYP_001327500 
Protein GI150397033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0465749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTC TTGCCAATAC CTATATGACC ACTCAAGCCG TGGGCAACCG CGAAGAACTC 
TCCGATGTGG TCTCGCGCAT CACGCCCGAG GACACCCCGA TCTATTCGTT CATCGAAAAG
GGCAAGTGCG TTTCCATTCA CCCCGAATGG GAAACGGACG AGCTTGCTGC TCCGGGGGAG
AACATCAAGA GCGAAGGTGA CGAATATGCC TTCGGCGCCA TCACCCCGCC CGAGCGCCTG
GGCAACTATA CCCAGATCAT GCGCAAGGAC TGGATCATCT CCGGTACGCA GGAAGTCGTT
TCCGAGGCCG GCAACGTCCA GAAGCGCAAA TACCAGAAGC TGAAGAAGGG CATCGAAATC
CGCAAGGACG TCGAATATGC CATCGTCGAC ACCAACGCCT CGGTCGCCGG CGCGACGCGC
GAATTCGGTT CGCTCAACAC CTGGATCGAG ACCAATGTTT CCCGCGGTGC CGGCGGCGCC
AATGGCGGTT TCGACAATGC GACCGGGCTT ACGGTGGCCC CGACCGATGG CGAGCAGCGC
GCATTCACCA AATCCATTTT GGATAGCGTG ATGCAGGCGG GCTATCAGAG CGGCGCCAAT
TTCCGCCACG TCTCGGTATC GCCCTACGTC AAGAGCGTGT TCGTCACCTT CATGTCGGAC
AGCAATGTGG CGCCGTTCCG CTACGCGGTC TCGCAAGGCG GCGAGCGCAA CACCATCGTT
GCCACGGCCG ACTATTACGA AGGCCCGTTC GGCACCGTCA TGATCCACCC GAACCGCGTT
CAGGCGGCGA CGGCGGCGAC GGCGCGCAAC GCCTTCTTCC TCGATACCGA CATGCTGGAA
TTCCTCTGGC TGCGAAAGAT CCAGGAAGAC AAGGACGTTG CCAAGACCGG CGACGCCGAC
AAGGGTGTGA TCATAGGCGA GGGCACGCTG AAGGTGAAGA ACGAGAAGGG CCTCGGCGTC
GCTGCCGACC TCTTCGGGCT GAGCGAGGCA GGCTGA
 
Protein sequence
MAALANTYMT TQAVGNREEL SDVVSRITPE DTPIYSFIEK GKCVSIHPEW ETDELAAPGE 
NIKSEGDEYA FGAITPPERL GNYTQIMRKD WIISGTQEVV SEAGNVQKRK YQKLKKGIEI
RKDVEYAIVD TNASVAGATR EFGSLNTWIE TNVSRGAGGA NGGFDNATGL TVAPTDGEQR
AFTKSILDSV MQAGYQSGAN FRHVSVSPYV KSVFVTFMSD SNVAPFRYAV SQGGERNTIV
ATADYYEGPF GTVMIHPNRV QAATAATARN AFFLDTDMLE FLWLRKIQED KDVAKTGDAD
KGVIIGEGTL KVKNEKGLGV AADLFGLSEA G