| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1812 |
|---|
| Symbol | |
|---|
| ID | 5322670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1893940 |
|---|
| End bp | 1894554 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640790750 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001327482 |
|---|
| Protein GI | 150397015 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.000930708 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGAAT TCGTCGACCT TCCGCCGCAC CGAAATGACC GCAAAATTCA ATGGCGGGCC
GACCTCATCA GAATCGCTCT TCTCCGGAAG TATGGTGGGG TATGGGTCGA TGCCACCACG
TTTTGCGTCA AGCCCCTGGA TGAGTGGCTT CCAACGTTGA TGGGTAGCGG CTTTTTCGCG
TACGTCGACA GCTATCCTGG CCGAGCTGTG ACCATATCGT TCCTCGCCGC CGTGCCGCAG
AACTATCTCG TGGCGAAGTG GTCGCGATTG ATGCTTCGGT ACTATTCGAA GCGCGGTAAG
CTGCGTCACT ATTTTTGGGT GATGTACCTG TTCGAGTATA TCATACGAAC GGACCGCAAG
GCCTGCGCCA TATGGGAGGC CACACCGAAA CTCACTCTCA AAGGGCCCGT CATTTTAAAG
CGCTTGCTCA CCCAGCCAAG CCTGGTGGAG CGGATCCCTG AAGATATTGA TGAGACCGCC
ATTCCATGGC TGAAGATCAG CTCCGGTACC AAGGTGACGA ATCAGGAAAT CCTTGAGGCA
ATAGAGAGCC GCAGGGACTT CGATTTGCGC AGGGTAGCTG AAATCGAGTG CCAGAAGCAC
CCATCAGAGC TCTAG
|
|---|
| Protein sequence | MGEFVDLPPH RNDRKIQWRA DLIRIALLRK YGGVWVDATT FCVKPLDEWL PTLMGSGFFA
YVDSYPGRAV TISFLAAVPQ NYLVAKWSRL MLRYYSKRGK LRHYFWVMYL FEYIIRTDRK
ACAIWEATPK LTLKGPVILK RLLTQPSLVE RIPEDIDETA IPWLKISSGT KVTNQEILEA
IESRRDFDLR RVAEIECQKH PSEL
|
|---|
| |