| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1803 |
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| Symbol | |
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| ID | 5322661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1887117 |
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| End bp | 1888892 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790741 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001327473 |
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| Protein GI | 150397006 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00129836 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGCCG AACAGTCCCT TTCGTTTATC GTGCTCGGCA TCATGATGAT CTTCTTCATG
TGGGGGCGGT TTCGCTACGA TATCGTGGCC TGCTCGGCGC TGATGCTCGC CGTTGCCGTC
GGCATCGTTC CCTTCGATCA CGCCTTTGAC GGGTTCAGCG ACGATATCGT CATCATCGTC
GGCAGCGCGC TCATCGTCAG CGCGGGCGTG GCGCGTTCGG GGGTGGTCGA TGCCGCCATC
CAGCGCTTTC TGCCGGAGCT GCAGTCCGTG AGGGCGCAGC TTGCTCTTCT TGTGGTCACG
GTGACCATTC TTTCAGCCTT CATAAAGAAC ATAGGCGCGC TTGCGATCAT GATTCCGGTC
GCGTTCCAGT TCGCGCGTCG CTCGAAAGTG CAGCCTTCGG TATTTTTGAT GCCGATGGCG
TTCGGATCGC TGATCGGCGG GCTGATGACG CAGGTCGGCA CATCGCCGAA CGTGGTCGTG
TCGCGGGTGC GTGCGGATCT CACGGGTGAG AGCTTCACCA TGTTCGACTT CACGCCCGTC
GGTGCTTCGC TGGCTCTGGT CGGCGCGGTG TTCCTGCTGT TCGGTTACAA GCTGGTGCCG
GAGCGGAAGA GTCAGCAGGT CGGCATGGAT CAGGCGGTCG AGATCACCGA CTATACGTCC
GAGGCGGTGG TTCCTGCCGG TTCGCCTGTC ATCGGCAAGC CGCTCAGCAA TCTGGTCAAG
ATCGGCGACG GAGGAGCGGT CGTGATCGCC GTCTTCCGTC GCGGCACGCA TCTGGCGCCC
TTGCCCGACG TCGTCATCGA GCTGGACGAT ATTCTACTGC TCGAAGGTGG TCCTGCGGCG
CTCGATCGCA TCGTTTCCCA AGCGAAACTC AAGATTTCCG GCGATCGCTC GCCGATGCCG
AACGACAAGG CGAAAGCCGA TACCGAAGCA ATCGAGGCGG TGATCGCCAC CGGTTCCCCC
CTTATCGGCA TGTCGGCGCA GCGCCTGGCG CTCTTCAACA ATCACAACAT CAACCTCTTG
GCCGTCAGTC GCCAGGGCGA ACGGTTGAAA CAGAGGCTTG GCAGCATCCG GCTGCGCGCC
GGCGATATCG TCGTGCTGCA GGGCACCCGC AGGGAGTTGC CCTCGTTTCT TCAGGACTTC
GGCTGCCTGC CGCTCGCGCA ACGGGAAATC CTGCTGGGCA CCATCCGCCG TGCCACCGTG
CCCCTGCTTG TGCTGGCGAC CGCGATGGGC GCGACCGCGC TGGGCATCGT ACCTGTGCAG
ATCGCATTTT TTGCTGCCGC GCTTGCCATG GTGGTGTTTC GCGTTATTCC GCTACGCGAC
GTCTACCGTG CGGTGGACGG ACCGATCCTG GTCATGCTTG CCGCGCTCAT CCCGGTCAGC
GAGACGTTAC GCACGACAGG CGGTTCGGAT CTGATCGCGG GGTGGCTGAG CGGGATGGCT
GCTGATCTCC CTCCTGCCGG GGCGCTTGCC ATCATGGTCG TGGCTGCCAT GGCGGTCACC
CCCTTCCTCA ATAATGCCGC TACGGTTCTC GTCATGGCCC CCATAGCGGC CAGTTTTGCG
ACGGCGCTCG ATTACAGGCC GGACGCCTTC CTGATGGCAG TTGCGATCGG CGCCGGCTCG
GACTTCCTCA CCCCGATCGG CCACCAGTGC AATACGCTGG TGATGGGACC CGGCGGCTAC
CGCTTCAGCG ACTACCCGCG ACTGGGGCTA CCGCTCTCTA TCGTCATCGT GATCGTCGCG
GTGCCGATGC TGATGTGGAT TTGGCCCCTG CGCTAA
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| Protein sequence | MTAEQSLSFI VLGIMMIFFM WGRFRYDIVA CSALMLAVAV GIVPFDHAFD GFSDDIVIIV
GSALIVSAGV ARSGVVDAAI QRFLPELQSV RAQLALLVVT VTILSAFIKN IGALAIMIPV
AFQFARRSKV QPSVFLMPMA FGSLIGGLMT QVGTSPNVVV SRVRADLTGE SFTMFDFTPV
GASLALVGAV FLLFGYKLVP ERKSQQVGMD QAVEITDYTS EAVVPAGSPV IGKPLSNLVK
IGDGGAVVIA VFRRGTHLAP LPDVVIELDD ILLLEGGPAA LDRIVSQAKL KISGDRSPMP
NDKAKADTEA IEAVIATGSP LIGMSAQRLA LFNNHNINLL AVSRQGERLK QRLGSIRLRA
GDIVVLQGTR RELPSFLQDF GCLPLAQREI LLGTIRRATV PLLVLATAMG ATALGIVPVQ
IAFFAAALAM VVFRVIPLRD VYRAVDGPIL VMLAALIPVS ETLRTTGGSD LIAGWLSGMA
ADLPPAGALA IMVVAAMAVT PFLNNAATVL VMAPIAASFA TALDYRPDAF LMAVAIGAGS
DFLTPIGHQC NTLVMGPGGY RFSDYPRLGL PLSIVIVIVA VPMLMWIWPL R
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