Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1802 |
Symbol | |
ID | 5322660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1886411 |
End bp | 1886974 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640790740 |
Product | hypothetical protein |
Protein accession | YP_001327472 |
Protein GI | 150397005 |
COG category | [S] Function unknown |
COG ID | [COG3803] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.796326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000766367 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTGGTTG GCGAAACCGA GATATGCACG CCGGAAGAGG TGCTGAAGTT CTGGTTTACG GAACTGTCCT ACGACCACTG GTTCACGCCG GATCCAGAGA TCGACCAGCG ATGCGCACAG CGATTTCAAG CGTCGCATCT GGCCTTGTCC CGAAAGCTCG ACCATGCCTG GCGCGAGACG CCGCATAACT GGCTCGCCGC CGTCATCCTT TTCGATCAGT TGCCGCGCAA CATGTATCGC GGGTCGCCGC TGGCCTTTGC CACGGATTGC CTTGCCTTAC GCGAGGCGAA GCTCGCCATC GGCGCGAGTG CCGATATGGC GGTACCCAGG GAATGGCGAA CTTTCTTCTA TATGCCCTTC GAGCACTCCG AAAATCTGAC GGACCAGACC ATGTCGGTCA AGTTGTTCAC CGAACTTGGA GACGCCAACT ACCTCGACTA TGCGATCCGA CATCGGGACG TGATCGAGCG TTTCGGCCGG TTTCCCCATC GGAACGAAAT CGTGGCACGC ACTTCCTCAG CGGCCGAGGA GGAATATCTC GCCCAGCCAG GCGCCGGATT CTAG
|
Protein sequence | MVVGETEICT PEEVLKFWFT ELSYDHWFTP DPEIDQRCAQ RFQASHLALS RKLDHAWRET PHNWLAAVIL FDQLPRNMYR GSPLAFATDC LALREAKLAI GASADMAVPR EWRTFFYMPF EHSENLTDQT MSVKLFTELG DANYLDYAIR HRDVIERFGR FPHRNEIVAR TSSAAEEEYL AQPGAGF
|
| |