Gene Smed_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1799 
Symbol 
ID5322657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1882263 
End bp1882901 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content61% 
IMG OID640790737 
Productintegral membrane protein TerC 
Protein accessionYP_001327469 
Protein GI150397002 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.916732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000172581 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAGATTT TCACTTCCGC CGGCCTGACG GCGTTGCTGC AGGTCATTGT GATCGACCTG 
GTGCTCGCCG GCGACAATGC GGTCGTCATC GGCCTTGCCG CAGCCGGCTT GCCGCTGGAG
CAACGCAAGA AGGCCATTCT CGTCGGCATT CTCGCCGCCA CCGTGCTTCG CATTGTGCTC
GCCATCTTCA CGGTCCAGCT TCTTGCAATC ATCGGACTTC TGCTTGCCGG TGGCCTCCTT
CTGCTTTGGG TCTGCTGGAA GATGTGGCGC GAGCTTCGCT CAGGCGGGCA CGAACTTGGC
GACCTCGAGA ACGCGGACAA TTCGGGCCCT AGAAAGACTT TCAGACAGGC GGCAACCCAG
ATCGTCATCG CAGATGTCTC CATGTCGCTC GACAACGTTC TTGCCGTCGC CGGGGCCGCC
CGCGAGCATC CAACCGTGCT CGTCTTTGGT CTTGCGCTCT CCATCGCAAT GATGGGTATC
GCCGCGAGCT TCATCGCGCG TCTGCTCGGC CGCTATCACT GGATCGCTTA TATCGGTCTG
GCGATCATTC TCTACGTCGC TCTTGATATG ATCTACCGCG GCGCGCTGGA GGTCTGGCCA
CATGTCGTGC CGGTGGCGCA GGCGCTGGCT GGTCTCTAG
 
Protein sequence
MEIFTSAGLT ALLQVIVIDL VLAGDNAVVI GLAAAGLPLE QRKKAILVGI LAATVLRIVL 
AIFTVQLLAI IGLLLAGGLL LLWVCWKMWR ELRSGGHELG DLENADNSGP RKTFRQAATQ
IVIADVSMSL DNVLAVAGAA REHPTVLVFG LALSIAMMGI AASFIARLLG RYHWIAYIGL
AIILYVALDM IYRGALEVWP HVVPVAQALA GL