| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1791 |
|---|
| Symbol | |
|---|
| ID | 5322649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1874077 |
|---|
| End bp | 1874676 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640790729 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001327461 |
|---|
| Protein GI | 150396994 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4430] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.424253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00317521 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA AAGAAATTCA ATTGCCCGTG ATTCATTTCG TGGACGCGAA GGCCTTCGAG
ACATGGATGG CAAAGCAGGG CCCCGCGTCC CAAGGCCTTT GGGTGAAATT CGCGAGAAAA
GCGTCCGGAA TAGCAAGCCT TACGCCGAGA GAGGCACTCG ACGTAGCGCT CTGTCATGGC
TGGATCGATG GTCAGCGACT GGGAGCCGAC GGCGACTATT TCTTGAACAA GTACACGCCG
CGTCGGGCGC GCAGCAGATG GTCGCAGGTC AATTGCGCTC GAGCGATGGA ATTGATTGCC
GAAGGGCGCA TGGCCCCCCG CGGCCTTGCC GAAGTGGAGC GCGCCAAGGC CGACGGCCGG
TGGGATGCCG CTGCCCCGCC GCCGAGCAAG GCCACCGTGC CTGACGACCT TCATGATGCG
CTCGCGCAGA ATGCAGCCGC GAAGTTGCTG TTCGACGATC TCGACAGCCG GAACCGCTAC
GCCATCCTAT TCCGCATTCA CGACGCGAAG AAGGCTGAGA CGCGCGCTGC GCGCATCGAT
AAATATGTCG GGATGCTGAG CCGGGGCGAG ACGCCCTACC CGCGGCGCAA AGCTCGATAG
|
|---|
| Protein sequence | MSEKEIQLPV IHFVDAKAFE TWMAKQGPAS QGLWVKFARK ASGIASLTPR EALDVALCHG
WIDGQRLGAD GDYFLNKYTP RRARSRWSQV NCARAMELIA EGRMAPRGLA EVERAKADGR
WDAAAPPPSK ATVPDDLHDA LAQNAAAKLL FDDLDSRNRY AILFRIHDAK KAETRAARID
KYVGMLSRGE TPYPRRKAR
|
|---|
| |