| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1787 |
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| Symbol | |
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| ID | 5322645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1870513 |
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| End bp | 1871175 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640790725 |
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| Product | chloramphenicol phosphotransferase family protein |
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| Protein accession | YP_001327457 |
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| Protein GI | 150396990 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3896] Chloramphenicol 3-O-phosphotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00305646 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGACCG GCTGCAATCC TGGACAGATC GTCATCCTCA ACGGTGCGCC ACGATCCGGA
AAGTCTAGCA TAGCGGAGGC GATCCAGGCG ACGTTCGACG GTCCATGGAT GAACCTTGGC
GTCGACACCT ATATGGAGCG GGTCACGCCT CCGCGCTACC TGCCGGGCAT AGGGTTACGG
CCCGGCGGTG AGTTGCCTGA GATCGAAGCG CTGGTACCCG TTTTCTATGC CGCCCTCTAC
GAGTCCATCG CCGCGCATAG CCGGTTGGGT CTGAATGTCG TCGCCGATTT GGGCCACCAC
GACGCCTATG CCGAACCTCG CAATATCCTT CCCGACTGTG CCCGTCGGCT CCTGGGCCTG
CCGGTTCTCT TCGTTGGAGT GCGCTGCCGG GTGGAGACTA TCATGGAGAG ACGCAATCGC
GGGCAGCCCG GTCGCGAAGG CCGCTATCTA ACCGGTGGCG GGTCCGAACC CGTTCCGCAC
CAAGTGCTCG CGTGGCAGCG CGAGGTGCAT CGCCCCGGCA TCTACGATCT CGCGGTCGAT
ACGTCGATGA TGACGCCTGG GGAATGCGCC GCGCTCATCC GCAAGCGGCT GGATGCCGGG
CTGACCACGC CGACGGCATT CCAGCGACTG GCCGCGACCG CAAGGGGTTC GCAGCCGGAT
TAA
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| Protein sequence | MKTGCNPGQI VILNGAPRSG KSSIAEAIQA TFDGPWMNLG VDTYMERVTP PRYLPGIGLR
PGGELPEIEA LVPVFYAALY ESIAAHSRLG LNVVADLGHH DAYAEPRNIL PDCARRLLGL
PVLFVGVRCR VETIMERRNR GQPGREGRYL TGGGSEPVPH QVLAWQREVH RPGIYDLAVD
TSMMTPGECA ALIRKRLDAG LTTPTAFQRL AATARGSQPD
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