| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1780 |
|---|
| Symbol | |
|---|
| ID | 5322638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1864052 |
|---|
| End bp | 1864522 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640790718 |
|---|
| Product | BA14K family protein |
|---|
| Protein accession | YP_001327450 |
|---|
| Protein GI | 150396983 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00576599 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA TTGGGATACT GTTCCTGGCG GCCCTGACGG CTTTCACCGG CAATGTGCCT
GCTGAGGCTA TGCCCGTCAT TTCCGCTCGG GTCTCGCAGG AAAGCGACGT GAAGCTGGTC
GATCACCGGG GCTGGCGCGG TCACGGACAC CGCCCACGCC ACGGCTGGCG CCGTCACGGC
CATCGTCATG GATGGCACAA TGGCCATCGC GGCTACAACT ACCACCGGCA CGGCTACCGC
AGGCACAGCG ACGGCTGGTG GTATCCTCTG GCCGCTTTCG GAGCCGGGAT GATCATCGGT
GGCGCCATCG CTCAGCCGCC CCGTTATGCC GAGCCGCGTT ACGCGGTGCC CGCACTGCCG
GCAAGTCATG TCAACTGGTG CTATGGCCGC TATCGCTCGT ACCGGGCTGC GGACAATTCC
TACCAGCCCT ATAACGGCCC CAGGCAGCAG TGCTATTCGC CATATTCCTG A
|
|---|
| Protein sequence | MKKIGILFLA ALTAFTGNVP AEAMPVISAR VSQESDVKLV DHRGWRGHGH RPRHGWRRHG
HRHGWHNGHR GYNYHRHGYR RHSDGWWYPL AAFGAGMIIG GAIAQPPRYA EPRYAVPALP
ASHVNWCYGR YRSYRAADNS YQPYNGPRQQ CYSPYS
|
|---|
| |