| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1776 |
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| Symbol | |
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| ID | 5322634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1861761 |
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| End bp | 1862459 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640790714 |
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| Product | methionine synthase |
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| Protein accession | YP_001327446 |
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| Protein GI | 150396979 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5012] Predicted cobalamin binding protein |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.354351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.011957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGACG ATGAAATCAT TCTCGAGGAC CTTTCCGATG AGGAACTCGT GCAGCAGATG
CATGACGACC TTTATGACGG TCTCAAAGAG GAAATCGAGG AAGCGACGCG AATCCTCCTC
AAGCGTGGCT GGACGCCATA CGACGTCCTG ACCCAAGCCC TGGTCGAAGG CATGCGCATC
GTCGGGATAG ATTTCCGCGA CGGCATTCTC TTTGTTCCGG AAGTGCTGCT TTCCGCCAAT
GCGATGAAGG CCGGTATGTT CATCCTGCGC CCGCTTCTCG TCGAGACTGG AGCGCCGAAG
CTCGGAAAGA TGGTTATCGG TACGGTCAAG GGCGACATCC ACGACATCGG CAAGAACCTC
GTCGGCATGA TGATGGAAGG CGCCGGCTTC GATGTCGTCG ACCTCGGTAT CAACAACCCG
GTTGAAAACT ACCTCGAAGC GCTCGAGCGT GAGAAGCCCG ACATCCTCGG CATGTCGGCA
CTGCTCACGA CCACCATGCC CTATATGAAG GTCGTTATCG ACACGATGAA AGAGAAGGGG
TTGCGCGACG AATACGTCGT CCTCGTGGGC GGTGCACCGC TCAATGAGGA GTTCGGCAAG
GCCGTCGGCG CTGACGCCTA TTGCCGCGAT GCCGCAGTCG CAGTCGAGAC CGCCAAGGAC
TACATGAAGC GTAAGCACAA CCAGCTTGCA GCCGGCTGA
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| Protein sequence | MADDEIILED LSDEELVQQM HDDLYDGLKE EIEEATRILL KRGWTPYDVL TQALVEGMRI
VGIDFRDGIL FVPEVLLSAN AMKAGMFILR PLLVETGAPK LGKMVIGTVK GDIHDIGKNL
VGMMMEGAGF DVVDLGINNP VENYLEALER EKPDILGMSA LLTTTMPYMK VVIDTMKEKG
LRDEYVVLVG GAPLNEEFGK AVGADAYCRD AAVAVETAKD YMKRKHNQLA AG
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