| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1770 |
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| Symbol | |
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| ID | 5322628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1853804 |
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| End bp | 1854685 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640790708 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001327440 |
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| Protein GI | 150396973 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.103333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0253433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCCAA TCGATCCTGA CCTTTTGCGT ACCTTTCTGG CGTTCGCCGA AGGAGGCTCA
CTTGCGAGAG CCGCGATAGT CGTCAACCGA ACACCCTCTG CCGTAACGGC GCAGATGCAG
CGATTGGAAG CTCTGATCGG TGAGCGGATT CTTGCACCCG CCGGCCGCGG CCGGGTGCTT
ACGCCCATCG GCGAGGAGCT CGCCGCGCAC GCCCGGCGCA TTCTCGATGC GCATCGTGAC
GCGTGGCTCA GCCTCAGGGG CGCGCGCGCC GATGGACGAA TTGTCCTCGG CAGCACTCAG
GACTTCGCCG ATACGATGCT GCCCGGATTG CTGCGCCTCT TTGCGCGCTC TCATCCGCGC
ATTCGCCTGG ACTTGAGAAT CGGCCGATCG AAGGAACTGA CGATCGCCTT CGATCAGGGC
CAGATCGACA TTCTTCTCGC CATGCGGCAG TCTGCTGCCG CAGACGAGTT GATCGTCCTC
CGAGAACAGA TGCTTTGGCT TTGCTCCGAC AGGGGCTTGG TAACGGACAC GGATGAAGTG
CCGCTAGCAG TCCTCGACGC GCCCTGCGGC TTCCGCACGG CCGCCATATC CGTCCTCGAA
GCCACCGGCC GTCGCTTTCG AATCGCGGCA ACGAGTCCCA GCCTGTCAGG TCTGCGCGCA
GCGGTCCTGA GCAGCATCGC CGTCACCACC CGGACGGAAC TGTTTCTCAG TGCCGGAATC
GGGCGCGCTC CTGAGCACCT CGCCCTGCCG TCGCTGCCGC CGGCCGAGTT CAGCCTGCGC
CTGCGCACCC GTGCGGAGGA GCCGGCAGCC GATCTTGCCG CCCTTCTGGC GGACGAACTG
CGACAAGACT GGGCTCAGAG GCCAGAACGC ATTTCAGCCT GA
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| Protein sequence | MRPIDPDLLR TFLAFAEGGS LARAAIVVNR TPSAVTAQMQ RLEALIGERI LAPAGRGRVL
TPIGEELAAH ARRILDAHRD AWLSLRGARA DGRIVLGSTQ DFADTMLPGL LRLFARSHPR
IRLDLRIGRS KELTIAFDQG QIDILLAMRQ SAAADELIVL REQMLWLCSD RGLVTDTDEV
PLAVLDAPCG FRTAAISVLE ATGRRFRIAA TSPSLSGLRA AVLSSIAVTT RTELFLSAGI
GRAPEHLALP SLPPAEFSLR LRTRAEEPAA DLAALLADEL RQDWAQRPER ISA
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