Gene Smed_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1758 
Symbol 
ID5322616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1837623 
End bp1838267 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content58% 
IMG OID640790696 
Productcob(I)yrinic acid a,c-diamide adenosyltransferase 
Protein accessionYP_001327428 
Protein GI150396961 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2109] ATP:corrinoid adenosyltransferase 
TIGRFAM ID[TIGR00708] cob(I)alamin adenosyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0230885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0532323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG AAATCGCGAA TACCGGCGAA CCGACTGCCG AAAAGGACGA AGCGCGTCAT 
GCCTTGAAGA TGGCGAAGAA GAAGACCGCC CGTGACAAGA TCATGGCCAC GAAGACGGAC
GAAAAAGGTT TGATCATCGT CCACACCGGC AAGGGCAAGG GCAAATCGAC CGCGGGCTTC
GGCATGATCT TTCGCCACAT CGCCCACGGC ATGCCCTGTG CCGTCGTTCA GTTCATCAAG
GGCGCCATGC ACACCGGCGA GCGCGACCTG ATCGAGAAAC ACTTCGGCGA CATCTGCCAG
TTCTACACGC TCGGCGAGGG CTTCACTTGG GAAACGCAGG ACCGCGCACG CGACATCGCC
ATGGCGGCCA AGGCCTGGGA GAAAGCCAAG GAACTCATCC GCGACGAGCG CAACTCCATG
GTCCTCCTCG ACGAAATCAA CATCGCCCTG CGCTATGACT ACATCGACGT CGCCGAGGTC
GTTCGCTTTC TCAAGGAGGA GAAGCCGCAC ATGACGCATG TGGTCCTGAC AGGCCGTAAC
GCCAAGGAGG ACCTGATTGA GATTGCAGAT CTTGTGACGG AGATGGAATT GGTGAAGCAT
CCATTCCGCT CGGGTATCAA GGGCCAGAAG GGCGTCGAAT TCTGA
 
Protein sequence
MSEEIANTGE PTAEKDEARH ALKMAKKKTA RDKIMATKTD EKGLIIVHTG KGKGKSTAGF 
GMIFRHIAHG MPCAVVQFIK GAMHTGERDL IEKHFGDICQ FYTLGEGFTW ETQDRARDIA
MAAKAWEKAK ELIRDERNSM VLLDEINIAL RYDYIDVAEV VRFLKEEKPH MTHVVLTGRN
AKEDLIEIAD LVTEMELVKH PFRSGIKGQK GVEF