Gene Smed_1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1757 
Symbol 
ID5322615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1837198 
End bp1837623 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID640790695 
Producthypothetical protein 
Protein accessionYP_001327427 
Protein GI150396960 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0344568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0517722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA GCTGGCAGTT CTGGGCGCTG CTGTCCGCGG CCTTCGCAGC GCTGACTGCC 
ATCTTCGCCA AAGTCGGTGT CGCCAATGTC AACTCCGATT TCGCGACGCT GATCCGGACG
GGTGTCATTC TTGTTGTGGT CGTCGGCATC GTTGCCGCGA CCGGACAATG GCAGCGCCCG
ACGGAGATTT CCGGGCGGAC CTGGCTCTTC CTTGGCCTAT CCGGTCTTGC GACAGGGGCC
TCCTGGCTTG CCTATTTTCG CGCGTTGAAG CTCGGCGATG CCGCTCGCGT CGCACCGATC
GACAAGCTGT CGATCGTGTT GGTTGCACTG TTCGGCGTGC TTTTTCTCGG CGAGAAACTC
AACCTGATGA ACTGGCTCGG TGTGGGCCTG ATCGCGGCTG GCGCTCTGCT GCTGGCGGTA
TTCTGA
 
Protein sequence
MTQSWQFWAL LSAAFAALTA IFAKVGVANV NSDFATLIRT GVILVVVVGI VAATGQWQRP 
TEISGRTWLF LGLSGLATGA SWLAYFRALK LGDAARVAPI DKLSIVLVAL FGVLFLGEKL
NLMNWLGVGL IAAGALLLAV F