| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1751 |
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| Symbol | |
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| ID | 5322609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1831471 |
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| End bp | 1833087 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790689 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001327421 |
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| Protein GI | 150396954 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.150343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0954392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAACT TGTTACTGGC CGGCGTCTGC GCCGCCGCAC TGATGGGAAA TCCCGCATTC
GCCGACGACA TCAAGCAGGG TGGCGAAATG ACCGTCACCT ATAAGGACGA TGTTTCGACA
CTCGATCCGG CGATCGGCTA CGACTGGCAG AACTGGTCGA TGATCAAGTC GCTGTTCGAC
GGCCTGATGG ATTATGTCCC GGGCACGACC GAGTTGCGTC CCGATCTTGC CGAAGCCTAT
GAAATCTCCG GGGACGGCAA AATCTTCACG TTCAAGCTGC GCCAGGGCGT CAAGTTTCAC
AATGGTCGTG AGCTGACTGC CGAGGACGTG AAATATTCGA TTGAGCGCGT GGTGAATCCG
ACGACCCAGA GCCCGGGTGC CGGGTTCTTC TCATCGATCA AAGGCTTCGA AGATGTCTCG
GCCGGAAAGG GGGGTGATCT GTCCGGCATC GCCGTGCAGG ATCCGCACAC AATCAGGTTC
GAACTGAGCC GGCCGGACGC CACCTTCCTC CACGTCATGG CGCTCAACTT TGCCCATGTC
GTGCCAAAGG AAGAGGTCGA GAAACACGGT GCGGATTTCG GGAAAAATCC CGTCGGTTCC
GGAGCGTTCA AGCTTGCCGA GTGGACGCTT GGGCAACGCC TGGTGTTCGA ACGCTTCGCC
GACTACTGGA ACGAAGGGCT TCCGAAGCTT GACCGCATTA CCTTCGAGGT CGGCCAGGAG
CCCGTTGTCG CGCTCCTTCG CCTGCAGAAC GGCGAAATCG ACGTGCCCGG AGACGGCATT
CCGCCGGCGA AGTTCGTCGA GGTGACCAAA GATCCTAATT TCAAGGAGCT GATCATTCAG
GGCGGTCAGT TGCACACCGG CTATGTGACG ATGAACGTCA AGATGGCCCC CTTCGACAAG
GTCGAGGTGC GCAAGGCTGT GAACATGGCC ATCAACAAGG ATCGCATCCT GCGCATCATC
AACGGTCGCG CAGTCGCCGC CAATCAGCCG CTGCCGCCCT CGATGCCGGG ATATGCCAAG
GATTATAAAG GATATGCCTA TGATCCCGAG GGCGCCAAGA AGCTGCTCGA ACAGGCCGGC
CTGGGCGACG GGTTCTCGAC CGAACTCTAT GTCATGAACA CCGACCCTCA GCCGCGTATC
GCCCAGGCCA TCCAGCAGGA CCTGAAGGCG ATCGGCATCA CGGCATCGAT AAAGTCGCTG
GCACAGGCCA ATGTCATCGC GGCGGGCGGC GAGGAGAACC AGGCGCCGAT GGTCTGGTCG
GGCGGCATGG CATGGATTGC CGACTTCCCG GATCCCTCGA ATTTCTACGG CCCCATTCTG
GGGTGCGGCG GTGCCGTGCC GGGAGGCTGG AACTGGTCCT GGTACTGCAA TGAGGAGCTC
GACAAGAAGG CAGCCGAAGC CGATGCCATC GTAGACCCGG CAAAGGCCGC CGAGCGCGAG
GCCATGTGGC GCGACATCTA TGTGAAGATC ATGGAGGACG CACCCTGGGC ACCGATCTTC
AACGAGGAGC GCTTTACCAT TCGCTCGGAG CGTATCGGCG GCGACGACAA GCTGTTCGTC
GATCCGGTCC ACATTCCCGT TCACTACGAT CAGGTATATG CAAAAGATGT GCAGTAA
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| Protein sequence | MRNLLLAGVC AAALMGNPAF ADDIKQGGEM TVTYKDDVST LDPAIGYDWQ NWSMIKSLFD
GLMDYVPGTT ELRPDLAEAY EISGDGKIFT FKLRQGVKFH NGRELTAEDV KYSIERVVNP
TTQSPGAGFF SSIKGFEDVS AGKGGDLSGI AVQDPHTIRF ELSRPDATFL HVMALNFAHV
VPKEEVEKHG ADFGKNPVGS GAFKLAEWTL GQRLVFERFA DYWNEGLPKL DRITFEVGQE
PVVALLRLQN GEIDVPGDGI PPAKFVEVTK DPNFKELIIQ GGQLHTGYVT MNVKMAPFDK
VEVRKAVNMA INKDRILRII NGRAVAANQP LPPSMPGYAK DYKGYAYDPE GAKKLLEQAG
LGDGFSTELY VMNTDPQPRI AQAIQQDLKA IGITASIKSL AQANVIAAGG EENQAPMVWS
GGMAWIADFP DPSNFYGPIL GCGGAVPGGW NWSWYCNEEL DKKAAEADAI VDPAKAAERE
AMWRDIYVKI MEDAPWAPIF NEERFTIRSE RIGGDDKLFV DPVHIPVHYD QVYAKDVQ
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