Gene Smed_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1750 
Symbol 
ID5322608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1830537 
End bp1831481 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content62% 
IMG OID640790688 
Productacetamidase/formamidase 
Protein accessionYP_001327420 
Protein GI150396953 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.057245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.122228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAGTA ACTGCGACTA CACCATCCAT GGACGCCATC ACCACTACGG CTGGGATCGT 
TCGATCCCGC CGGCGGAGAC CGTGGCGTCC GGATCGAGGC TCGAGTTCAA CTGCCTCGAT
TCAGGCTCCG GCCATTTTAC TGCCGGCAGC ACGGTGGCCG ATGTCTCGAC GGTGGATTTC
ACGAAGGTCA ATCCGGTCAC CGGCCCCATC TATGTCGATG GAGCCATGCC GGGTGACGCC
CTGAAGGTCA CCATCGAGCA TTTCAAGCCA AGCGGTTTTG GCTGGACCGC CAACATTCCC
GGCTTCGGGC TCCTCGCCGA CCAATTTGAG GAGCCGGCGC TGGCCCTTTG GAAATATGAT
CCGGATACCC TTGCTCCGGC TGCCTTTGGC GAGTTCGGCC GGGTTCCGCT GAAGCCGTTC
GCCGGCACGA TCGGGCTTGC CCCGGCGGAG CCGGGGCTGC ATTCCGTCGT TCCGCCGCGG
CGTGTGGGAG GCAATCTCGA CATTCGCGAC CTTGCGGCGG GAACGACCCT GTACCTGCCC
GTCGAGGTCG AAGGCGCCTT GTTCTCCATC GGCGATACGC ATGCGGCACA GGGTGATGGC
GAAGTCTGCG GAACCGCCAT CGAGAGCGCC ATGGATGTGG TCGTGAAGCT GGATGTGGTC
AAGGGCGCGA ATCTTCACAT GCCGCGCTTT ACCACACCCG GACCGGTCAC GCGGCATCTC
GATGCCGAAG GCTATGAAGT TACGACGGGT ATCGGAAGCG ATCTGATGGA AGGTGCGCGT
GCAGCCGTAT CCGGCATGAT TGACCTTCTC TGTGCGACAC ACGGCATGAA ACCGGAAGAT
GCCTATATGC TCTGCTCGGT CTGCGGTGAT CTGCGCATCA GCGAGATCGT CGACCAGCCG
AACTGGGTCG TATCCTTCTA TTTTCCGCGC GTCGTGTTCG CGTGA
 
Protein sequence
MCSNCDYTIH GRHHHYGWDR SIPPAETVAS GSRLEFNCLD SGSGHFTAGS TVADVSTVDF 
TKVNPVTGPI YVDGAMPGDA LKVTIEHFKP SGFGWTANIP GFGLLADQFE EPALALWKYD
PDTLAPAAFG EFGRVPLKPF AGTIGLAPAE PGLHSVVPPR RVGGNLDIRD LAAGTTLYLP
VEVEGALFSI GDTHAAQGDG EVCGTAIESA MDVVVKLDVV KGANLHMPRF TTPGPVTRHL
DAEGYEVTTG IGSDLMEGAR AAVSGMIDLL CATHGMKPED AYMLCSVCGD LRISEIVDQP
NWVVSFYFPR VVFA