Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1750 |
Symbol | |
ID | 5322608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1830537 |
End bp | 1831481 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640790688 |
Product | acetamidase/formamidase |
Protein accession | YP_001327420 |
Protein GI | 150396953 |
COG category | [C] Energy production and conversion |
COG ID | [COG2421] Predicted acetamidase/formamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.057245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.122228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCAGTA ACTGCGACTA CACCATCCAT GGACGCCATC ACCACTACGG CTGGGATCGT TCGATCCCGC CGGCGGAGAC CGTGGCGTCC GGATCGAGGC TCGAGTTCAA CTGCCTCGAT TCAGGCTCCG GCCATTTTAC TGCCGGCAGC ACGGTGGCCG ATGTCTCGAC GGTGGATTTC ACGAAGGTCA ATCCGGTCAC CGGCCCCATC TATGTCGATG GAGCCATGCC GGGTGACGCC CTGAAGGTCA CCATCGAGCA TTTCAAGCCA AGCGGTTTTG GCTGGACCGC CAACATTCCC GGCTTCGGGC TCCTCGCCGA CCAATTTGAG GAGCCGGCGC TGGCCCTTTG GAAATATGAT CCGGATACCC TTGCTCCGGC TGCCTTTGGC GAGTTCGGCC GGGTTCCGCT GAAGCCGTTC GCCGGCACGA TCGGGCTTGC CCCGGCGGAG CCGGGGCTGC ATTCCGTCGT TCCGCCGCGG CGTGTGGGAG GCAATCTCGA CATTCGCGAC CTTGCGGCGG GAACGACCCT GTACCTGCCC GTCGAGGTCG AAGGCGCCTT GTTCTCCATC GGCGATACGC ATGCGGCACA GGGTGATGGC GAAGTCTGCG GAACCGCCAT CGAGAGCGCC ATGGATGTGG TCGTGAAGCT GGATGTGGTC AAGGGCGCGA ATCTTCACAT GCCGCGCTTT ACCACACCCG GACCGGTCAC GCGGCATCTC GATGCCGAAG GCTATGAAGT TACGACGGGT ATCGGAAGCG ATCTGATGGA AGGTGCGCGT GCAGCCGTAT CCGGCATGAT TGACCTTCTC TGTGCGACAC ACGGCATGAA ACCGGAAGAT GCCTATATGC TCTGCTCGGT CTGCGGTGAT CTGCGCATCA GCGAGATCGT CGACCAGCCG AACTGGGTCG TATCCTTCTA TTTTCCGCGC GTCGTGTTCG CGTGA
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Protein sequence | MCSNCDYTIH GRHHHYGWDR SIPPAETVAS GSRLEFNCLD SGSGHFTAGS TVADVSTVDF TKVNPVTGPI YVDGAMPGDA LKVTIEHFKP SGFGWTANIP GFGLLADQFE EPALALWKYD PDTLAPAAFG EFGRVPLKPF AGTIGLAPAE PGLHSVVPPR RVGGNLDIRD LAAGTTLYLP VEVEGALFSI GDTHAAQGDG EVCGTAIESA MDVVVKLDVV KGANLHMPRF TTPGPVTRHL DAEGYEVTTG IGSDLMEGAR AAVSGMIDLL CATHGMKPED AYMLCSVCGD LRISEIVDQP NWVVSFYFPR VVFA
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