Gene Smed_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1737 
Symbol 
ID5322595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1816982 
End bp1818010 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content64% 
IMG OID640790675 
Productalcohol dehydrogenase 
Protein accessionYP_001327407 
Protein GI150396940 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.297845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCC TGCAATTGCT CGATGACCGC AAACTTGAAA TCACCGATCT GCCGGAGCCG 
GAGGCTCCCG GCCCCGGCGA GGTGACGCTG CGGGTCAAGG CGGTCGCCCT CAACCATATC
GACGTTTGGG GCTGGCGCGG AATGGCTTTC GCCAAGCGGA AAATGCCGCT CGTCATTGGC
GCGGAAGCGT CGGGGGTCGT GGAGAGCATC GGGTCGGGTG TCGCCAATGT TCTTCCCGGT
CAGCTCGTCT CGATCTACGG TGCGCGCACC TGCGGCCTAT GCCGTCCGTG CCGTGAGGGC
CGCGACAACC TCTGCGAGCA TGTGGGCGGC GTGCACGGAT TCCATCTGGA CGGCTTCGCG
CAGGAGAAGG TCAACCTTCC TGCGCGCCTG TTGGTACCGG CGCCTCCGGG CGTCGACGAA
ATTGGTGCGG CACTCGCCCC GGTCACCTTC GGTACCGTCG AGCATATGCT GTTCGACAAT
GCCAGGCTCG AACCGGGCGA GACGATCCTC GTCCATGCGG GTGGCTCGGG CATCGGCTCG
GCGGCGCTCC AGCTCGCCAA GAAGATTGGC TGCACGGTCA TCACCACCGT GGGCTCGGAC
GACAAGATAG AGCGGGCGAA GGCGCTCGGC GCCGACCATG TCATCAACTA CCGGACCGAT
CGTTTTGAGG GCGTCGTACG GAAGCTGACG AAGAAAAAGG GCGTCGATGT GGTCTTCGAG
CATGTCGGCA AGGATACCTG GGCGGGTTCG ATGCTGTCGA TGAAACGGGG CGGGCGCCTT
GTCACCTGCG GCTCGACCTC CGGCGTCTCG ACCGACATGA ACCTGATGAT GCTCTTCCAG
CAGCAGCTGA AATTGCTCGG CTCCTTCGGC TGCCGCATGG AGAACATGGC GAATGCCATG
CAGAAAATGG CGCGCGGGCT CGTGCATCCG GTGATCGACA CCGAGGTCGG ACTTAACGAC
ATCGACCGCG CGCTGGAGCG GATGGAGTCG CGCCAGATCT TCGGCAAGAT CGTGCTGCGG
ATGGACTGA
 
Protein sequence
MRALQLLDDR KLEITDLPEP EAPGPGEVTL RVKAVALNHI DVWGWRGMAF AKRKMPLVIG 
AEASGVVESI GSGVANVLPG QLVSIYGART CGLCRPCREG RDNLCEHVGG VHGFHLDGFA
QEKVNLPARL LVPAPPGVDE IGAALAPVTF GTVEHMLFDN ARLEPGETIL VHAGGSGIGS
AALQLAKKIG CTVITTVGSD DKIERAKALG ADHVINYRTD RFEGVVRKLT KKKGVDVVFE
HVGKDTWAGS MLSMKRGGRL VTCGSTSGVS TDMNLMMLFQ QQLKLLGSFG CRMENMANAM
QKMARGLVHP VIDTEVGLND IDRALERMES RQIFGKIVLR MD