Gene Smed_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1736 
Symbol 
ID5322594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1816048 
End bp1816971 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content62% 
IMG OID640790674 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_001327406 
Protein GI150396939 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.161079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.577927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCA CAAGGCTGGT GCTTGCTGCG GATCGTTTCC GCCAGTGGCT GATCGCGCAG 
TTCGTCCTGC TGCTTCTCAC GATCCTCAAG CTTTTCCCCC CGGACAAAGC GATCAATTTC
ATGGATCGCG TTGCCCGCTG GATCGGTCCG AAGACCGGTC GCCACAAGCT GACGCTGATC
AATCTGCGCA ATGCGTTTCC CGAGAAGAGC GATGCCGAGA TCGAAGAGAT CGCGCTGGAA
AGCTGGGGCA ACATGGGACG CCTCGCTGCC GAGTATGTCT TTCTCGATCG GCTCTTCGAC
TTCGATCCGG CGCGCATTGA GGCGGGCAGG GTGGATGTTT CCGGCATCCC GCTCTTCCTG
GAACTGCGCG ACAATCCGCG GCCCTTCATC GTCTTCACGG CCCATAGCGG CAATTTCGAA
ATGCTGCCGG TCGCAGGCTC CGCTTTCGGT CTGGACGTGA CGGTGCTCTT CCGTCCTCCG
AACAATCCCT ACCTCGCCGA CCGGGTATTT GAATTCCGCA GGCAGCGCAT GGGCAACCTC
GTGCCGTCGC ACGCCGGCTC CTCCTTCGCC CTGGCCAGGC AGCTCGAACG CGGCGGCGGC
GTCGGCGTCC TCGTCGACCA GAAGTTTCGC AAGGGTCTGA AGACGAAATT CTTCGGGCAG
GACGTGCAGA CGAATCCGCT GCTAGCCAAG CTCGTCCGCC AGTTCAATTG CGAGGTCTAC
CCGGCCCGCT GCATTCGGCT ACCCGGCAAC CGCTTCCGGC TGGAGCTCGA GCCGGCGGTC
GAAATCCCCC GCAGAACCGA CGGCAGCGTC GATGTCACGG CAACGGCGCA GATGCTGAAC
GACAAGGTCG AGAGCTGGGT TCGCGAATAT CCGGGCCAGT GGCTCTGGTA TCATGATCGC
TGGCACATCA AGCGGACTCT TTGA
 
Protein sequence
MLITRLVLAA DRFRQWLIAQ FVLLLLTILK LFPPDKAINF MDRVARWIGP KTGRHKLTLI 
NLRNAFPEKS DAEIEEIALE SWGNMGRLAA EYVFLDRLFD FDPARIEAGR VDVSGIPLFL
ELRDNPRPFI VFTAHSGNFE MLPVAGSAFG LDVTVLFRPP NNPYLADRVF EFRRQRMGNL
VPSHAGSSFA LARQLERGGG VGVLVDQKFR KGLKTKFFGQ DVQTNPLLAK LVRQFNCEVY
PARCIRLPGN RFRLELEPAV EIPRRTDGSV DVTATAQMLN DKVESWVREY PGQWLWYHDR
WHIKRTL