Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1722 |
Symbol | |
ID | 5322580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1801292 |
End bp | 1802425 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790660 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001327392 |
Protein GI | 150396925 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.996636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAAAG AACTTGGCGT CGGCATCATC GGATGCGGCA ATATTTCAAC GACCTATTTC AAACTCGCTC CACTGTTCAA GGGTATCAGG ATCGCCGCAT GCGCCGACAT CAATCCGGTG GCGGCTGAAG CACGCGGCGC GGAATTCGAC GTCACGGCGC AGAGCATCGA AGCGCTTCTC GCCAACCCGG AAGCGGACAT CGTCGTCAAT CTGACGATTC CGGAGGCGCA CTTCCCGGTT TCAAAGGCCA TTTTGGAAGC GGGCAAGCAT GTCTATTCGG AAAAACCTTT GGTGCTCTCG CTGGAGCAGG GGGAAGAGCT CAGGAGCATC GCCACGAGGA AAGGGCTGAC TGTCGGCTGC GCACCGGACA CTTTCCTCGG CGGTGCACAC CAGCTCGCCC GCAATTATAT CGACGCGGGC AAGATCGGCC GGGTCACCTC CGGCACCTGT CACGTCATGA GCCCCGGTAT GGAAATGTGG CATCCGAATC CGGACTTCTT CTTCCTGCCG GGCGGCGGGC CGATCCTCGA CCTCGGGCCC TATTACATTG CCAACCTGAT CAACCTGATC GGACCGGTAA AACGCGTAGC TGCACTGTCC TCCATGGCAA GCACGACGCG GACCATCACC AGCGAGCCCC GAAAGGGCGA GGTTATCCCG GTCAGGACAC CTACCAACAT ACACGCCCTG CTCGAATTCC AGAACGGTGC GACCATCACC CTCTCGGCAA GCTGGGATGT CTGGGCGCAT CGCCATGCAA ACATGGAGCT TTACGGCACA GATGGCTCAC TCTTCGTTCC GGATCCAAAT TTTTTCGGGG GCACGGTCGA AGCCAGCGGA CGGAACAAGG ACATACAGCC GCTCGAAATG TGGGACCATC CGTTCGCCGT CAACAACTGG GACCATCCGC TCGGCCCGAT CGCCAATTAT CGCGCGGCGG GGCTCGCGGA CATGGCAGAT GCGATCCTCA AGGGCCGCGA CGCTCGCTGC TCGCTCGAAC GCACGCTGCA CGGGGTCGAC GTGATGGTTT CGATCCTGAA ATCGGGCGAG GAGGGAGGCT TCGTCACATT GTCGACGACC TGCACCCAGC CGGCGGCGCT TGGAATTGAA GAGGCGAGGG CGCTCTTGCG CTGA
|
Protein sequence | MTKELGVGII GCGNISTTYF KLAPLFKGIR IAACADINPV AAEARGAEFD VTAQSIEALL ANPEADIVVN LTIPEAHFPV SKAILEAGKH VYSEKPLVLS LEQGEELRSI ATRKGLTVGC APDTFLGGAH QLARNYIDAG KIGRVTSGTC HVMSPGMEMW HPNPDFFFLP GGGPILDLGP YYIANLINLI GPVKRVAALS SMASTTRTIT SEPRKGEVIP VRTPTNIHAL LEFQNGATIT LSASWDVWAH RHANMELYGT DGSLFVPDPN FFGGTVEASG RNKDIQPLEM WDHPFAVNNW DHPLGPIANY RAAGLADMAD AILKGRDARC SLERTLHGVD VMVSILKSGE EGGFVTLSTT CTQPAALGIE EARALLR
|
| |