Gene Smed_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1722 
Symbol 
ID5322580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1801292 
End bp1802425 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content60% 
IMG OID640790660 
Productoxidoreductase domain-containing protein 
Protein accessionYP_001327392 
Protein GI150396925 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.996636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAG AACTTGGCGT CGGCATCATC GGATGCGGCA ATATTTCAAC GACCTATTTC 
AAACTCGCTC CACTGTTCAA GGGTATCAGG ATCGCCGCAT GCGCCGACAT CAATCCGGTG
GCGGCTGAAG CACGCGGCGC GGAATTCGAC GTCACGGCGC AGAGCATCGA AGCGCTTCTC
GCCAACCCGG AAGCGGACAT CGTCGTCAAT CTGACGATTC CGGAGGCGCA CTTCCCGGTT
TCAAAGGCCA TTTTGGAAGC GGGCAAGCAT GTCTATTCGG AAAAACCTTT GGTGCTCTCG
CTGGAGCAGG GGGAAGAGCT CAGGAGCATC GCCACGAGGA AAGGGCTGAC TGTCGGCTGC
GCACCGGACA CTTTCCTCGG CGGTGCACAC CAGCTCGCCC GCAATTATAT CGACGCGGGC
AAGATCGGCC GGGTCACCTC CGGCACCTGT CACGTCATGA GCCCCGGTAT GGAAATGTGG
CATCCGAATC CGGACTTCTT CTTCCTGCCG GGCGGCGGGC CGATCCTCGA CCTCGGGCCC
TATTACATTG CCAACCTGAT CAACCTGATC GGACCGGTAA AACGCGTAGC TGCACTGTCC
TCCATGGCAA GCACGACGCG GACCATCACC AGCGAGCCCC GAAAGGGCGA GGTTATCCCG
GTCAGGACAC CTACCAACAT ACACGCCCTG CTCGAATTCC AGAACGGTGC GACCATCACC
CTCTCGGCAA GCTGGGATGT CTGGGCGCAT CGCCATGCAA ACATGGAGCT TTACGGCACA
GATGGCTCAC TCTTCGTTCC GGATCCAAAT TTTTTCGGGG GCACGGTCGA AGCCAGCGGA
CGGAACAAGG ACATACAGCC GCTCGAAATG TGGGACCATC CGTTCGCCGT CAACAACTGG
GACCATCCGC TCGGCCCGAT CGCCAATTAT CGCGCGGCGG GGCTCGCGGA CATGGCAGAT
GCGATCCTCA AGGGCCGCGA CGCTCGCTGC TCGCTCGAAC GCACGCTGCA CGGGGTCGAC
GTGATGGTTT CGATCCTGAA ATCGGGCGAG GAGGGAGGCT TCGTCACATT GTCGACGACC
TGCACCCAGC CGGCGGCGCT TGGAATTGAA GAGGCGAGGG CGCTCTTGCG CTGA
 
Protein sequence
MTKELGVGII GCGNISTTYF KLAPLFKGIR IAACADINPV AAEARGAEFD VTAQSIEALL 
ANPEADIVVN LTIPEAHFPV SKAILEAGKH VYSEKPLVLS LEQGEELRSI ATRKGLTVGC
APDTFLGGAH QLARNYIDAG KIGRVTSGTC HVMSPGMEMW HPNPDFFFLP GGGPILDLGP
YYIANLINLI GPVKRVAALS SMASTTRTIT SEPRKGEVIP VRTPTNIHAL LEFQNGATIT
LSASWDVWAH RHANMELYGT DGSLFVPDPN FFGGTVEASG RNKDIQPLEM WDHPFAVNNW
DHPLGPIANY RAAGLADMAD AILKGRDARC SLERTLHGVD VMVSILKSGE EGGFVTLSTT
CTQPAALGIE EARALLR