| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1717 |
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| Symbol | |
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| ID | 5322575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1796739 |
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| End bp | 1797920 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790655 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001327387 |
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| Protein GI | 150396920 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.25226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAC GATCCTGGCT CCTGCGGCAC GCCAAATCCT TCGTCCTGAT TGCGCCACTG
GCGCTATTTC TTGCCTTCTT CTTCGTTGCC CCGCTGGTAA CCATGATGAA GACGGCCGTC
TCCGATCCCG TCGCTTCTCG GGCGCTTCCG AATATCGCCG CTGCCCTCGA CGGCTGGGAT
CGTACAAGCG CCCCGCCGGC TGATGCGCAG AGAGCGTTGG TCGCGGATAT CCGGGGAATA
CAGGAGGATG AACTGTTCGG TGACCTGGTT CGCAGGCTGA ACAGCGCGAA GTCCGGTTTC
CGTACTCTGA TGGGCAAGAC CAGAAAGGCC GTTGCCGAGA ACCCGAACCT CGATGACCTG
ATTTCCGTCG ACAAGCGATG GAGCGACCCG GCATTTTGGA TTGCGGTGCA GGATGCGGCG
AGCTCGCCCG TCACCGACAG GAACCTTCTT GCAGCTGTCG ATCTGACGCG CGATTTGAAT
GGCAATATCA TCGAAGCGCC TGCCGGTACC TCGGCGAACC GCGAAACGCT GATTCGCACC
ATTGTCATGG CCGGCATGGT AACCATATGC ACCGTTCTGA TCGGGCTGCC TTTCGCGATG
GTTGCGGCCT CGACCACAGG ATGGAAACGT CAACTCTTGC TCGGAGCGGT GCTGCTCCCG
CTCTGGACGT CGCTCCTCGT CAGGACGGCC GCCTGGTACA TCATTCTGCA AGACAACGGC
TTGATCAATT TAACACTCCA GGCGATCGGC CTGACCGAAG GGCCATTGCC TCTGATCTTC
AATCGGCTCG GCGTCGTCAT CGCGATGACC CATGTCCTGC TTCCATTCAT GGTGCTGCCG
ATCTTCAGTG TCTTGATCGG CATCCCCAAG AACCTCATGC CGGCTGCGGC CTCGTTGGGC
GCTTCACCTG TCCGGTCATT CCTTTCGGTG CTTCTGCCCC TCAGCCTGCG AGGCGTCGTG
TCCGGATCGC TGCTCGTATT CATGAGCGCT CTTGGCTACT ACATCACGCC CGCACTGATC
GGCGGTGCAA AGGACCAGAT GATCAGCGCC GTGATCGCTT ATTATGCGAC GGGGGCGGCC
AACTGGGGCA TGGCCGGCGC GCTCGGAATC GTTCTGCTGA CCGCCACGAT CATTCTGTAT
GTCGTGTATT TGCGGCTCTC ATCCGAGGAG GCAAAGGCAT GA
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| Protein sequence | MKQRSWLLRH AKSFVLIAPL ALFLAFFFVA PLVTMMKTAV SDPVASRALP NIAAALDGWD
RTSAPPADAQ RALVADIRGI QEDELFGDLV RRLNSAKSGF RTLMGKTRKA VAENPNLDDL
ISVDKRWSDP AFWIAVQDAA SSPVTDRNLL AAVDLTRDLN GNIIEAPAGT SANRETLIRT
IVMAGMVTIC TVLIGLPFAM VAASTTGWKR QLLLGAVLLP LWTSLLVRTA AWYIILQDNG
LINLTLQAIG LTEGPLPLIF NRLGVVIAMT HVLLPFMVLP IFSVLIGIPK NLMPAAASLG
ASPVRSFLSV LLPLSLRGVV SGSLLVFMSA LGYYITPALI GGAKDQMISA VIAYYATGAA
NWGMAGALGI VLLTATIILY VVYLRLSSEE AKA
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