Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1714 |
Symbol | |
ID | 5322572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1793871 |
End bp | 1794419 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640790652 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001327384 |
Protein GI | 150396917 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.510937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGAAAA TCGGAAGCAA ACTTCGTGAA CTGCGCCGGA GACGAGACTT GGGTGTCAGA GAGCTTGCCG CGCGGTCCGG AATTTCGCAC TCCACGATTT CACTTATCGA GCGAGACCGG ATGAGCCCGT CGATCGACAC GCTCGGCGCG GTGCTCGATG CCCTGGGCAC CACATTGCCC GGCTTCTTTT CCGACCTGCA ATCGAGCCTT CCGTATACGC CGTTCTATTC CTCGACCGAC CTCATCGAGA TTGGAAAGGT TGATACAATC TCCTATCGCG TCATCGGACT GGACCACCCC AACAGACAGA TGCTCATGCT CCACGAACGT TACGCGATCG GCGCAGATAC CGGCGAGGAG TTCACGCATG CAGCCCAGGA GGCCGGCATG GTCCTGTCCG GAGCAGTCGA GGTGACGGTA GGCAATCAGA AGCGTGTGTT GCACCCTGGT GACGGCTATT ATTTCGATAG CCGCCTCCCC CATCGTTTCC GGAACGTTCA CGACGGCCAG AGCGAGGTCG TGAGCGCCAT CACGCCGCCG ACTTATTGA
|
Protein sequence | MPKIGSKLRE LRRRRDLGVR ELAARSGISH STISLIERDR MSPSIDTLGA VLDALGTTLP GFFSDLQSSL PYTPFYSSTD LIEIGKVDTI SYRVIGLDHP NRQMLMLHER YAIGADTGEE FTHAAQEAGM VLSGAVEVTV GNQKRVLHPG DGYYFDSRLP HRFRNVHDGQ SEVVSAITPP TY
|
| |