| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1711 |
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| Symbol | |
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| ID | 5322569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1789875 |
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| End bp | 1790450 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640790649 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001327381 |
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| Protein GI | 150396914 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0725939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGT TACTCGGCTT CAGCCGACTT ATCGACACCA TCACGGAAAA GATCGGCAAG
GCGGTCTCGT GGCTCATCCT GGTGGCGGTG CTCGTGAGCG CCGGCAACGC CATCATCCGA
AAAGCGTTCA ACATGTCGTC CAATGCATGG CTCGAGGCGC AGTGGTATCT CTTCGGCGCC
GCCTTCATGT TCGCGGCCGC TTACACGCTG AGCCAGAATG AGCACATCCG TATCGACGTC
GTCTATGGAA TGTTCTCGCG CCGCGTACAG CACTGGATCG ACCTCTTCGG GCACGTCTTC
TTCCTGATGC CGTTCGTGGT TCTTATGCTC TATTACCTCG TGCCCTACGT GCGCATGTCC
TATGTCTCGG GTGAACTTTC CTCGAGCGCG GGCGGGCTCG TCATCTGGCC GGCGAAAGCG
ATCCTGCTGA TCGGCTTCGT GCTTCTCGCC CTGCAGGGCG TTTCGGAAAT CATCAAGAAA
ATCGCCATCA TGACCGGCAA CATGGACGAT CCGACGCCTT ATGTTCCTGC GCATGCACCG
CTCGATGACG TCGTATCGCC GGAGGCGCGT TCATGA
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| Protein sequence | MKPLLGFSRL IDTITEKIGK AVSWLILVAV LVSAGNAIIR KAFNMSSNAW LEAQWYLFGA
AFMFAAAYTL SQNEHIRIDV VYGMFSRRVQ HWIDLFGHVF FLMPFVVLML YYLVPYVRMS
YVSGELSSSA GGLVIWPAKA ILLIGFVLLA LQGVSEIIKK IAIMTGNMDD PTPYVPAHAP
LDDVVSPEAR S
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