Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1707 |
Symbol | |
ID | 5322565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1785786 |
End bp | 1786553 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790645 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001327377 |
Protein GI | 150396910 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGG CTGGCAAAGT CGTACTCGTA ACGGGGGCGG CGCGTGGGAT CGGGGCGGCC ATTTCTGTCC GGCTCTGGCA GGAGGGCATG TTTGTCTATG CCGCCGATAT TGATGAGGAA GCGCTGGCCG GTGCGGCGCC GGCAGGCGCG GATGAACGTT GGATTCCGGC CGGGGTGGAC ATTACCGATC GGGGTTCGAT CGACAGGCTC ATTGCCGCAA TCGGCCTGCG GTTCGGCGTC CTCCATGGAC TGGTCAACAA CGCTGCGATG CTTGACGCAA GTCTCTTAGC CGAACTGGAC TATGACCGCT ACCGCCGCGT AGTGGCGACG AACCTCGACG GAGCGTTGCT TTGCGTATTG AGCGCGCTTG AACTGATCAA AGCTTCCGCA CCTTCGGCCA TCGTAAATAT CGCCTCTATC ATGGGTATGG CCGGGTTGCG CGACGCAATT CCTTATTCGA CGGCCAAGGC CGGTCTCATC AATATGACGC GCAATCTGGC GGTGGAATTG GCGCCCCAGT CCATCCGGGT GAACGCGGTC GCCCCCGGTT TCATCGACAC GCGAATGGCG CGGCTTGCCG ATGGCAGCAG CGAATATGCT ACCGAAGAAT TCAGGGAAGT CTATTTGAAG CACCGGCGGC TCCCGCTGGG TCATCCCGGA ACCGCCGAGG ATATCGCCGG ACCCGTCGCG TTCCTCCTTT CCTCCGACGC CCGCTACATC ACCGGCCATA CGCTGGTGGT GGATGGTGGG GTTACTGCAA CCTATTGA
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Protein sequence | MNLAGKVVLV TGAARGIGAA ISVRLWQEGM FVYAADIDEE ALAGAAPAGA DERWIPAGVD ITDRGSIDRL IAAIGLRFGV LHGLVNNAAM LDASLLAELD YDRYRRVVAT NLDGALLCVL SALELIKASA PSAIVNIASI MGMAGLRDAI PYSTAKAGLI NMTRNLAVEL APQSIRVNAV APGFIDTRMA RLADGSSEYA TEEFREVYLK HRRLPLGHPG TAEDIAGPVA FLLSSDARYI TGHTLVVDGG VTATY
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