| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1706 |
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| Symbol | |
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| ID | 5322564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1784003 |
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| End bp | 1785292 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790644 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001327376 |
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| Protein GI | 150396909 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCG CGATTTTATC GCATCCTGCA TTGTCGCTAA CGATGCAGGG CGGGGATATG
CTTCAGGCTG ACGAGGTGGT GGCAATGCTG CGGCTGCACG AGCTTGGTTG GGGTAGCAAA
CGTCTATCGA AAGAATTTGG ATGCGCGCGG AATACCGTTC GCCGATATCT TCGAGAGGGC
GGAGCTGTAC CGTTTAAACA GCCTGCCCGG CGCAGTGCGT TCGACGGGCT TGATGATTGG
CTTCGCGAGC GTTTTTTCCG GCATGACGGT AATGCGGATG TGATCCGCCA AGAGTTGGCG
AGCGAGCACG GAATTGTCAT CGGTCTGCGT TCTGTGGAGC TCCGCGTACG GCAGTGGCGG
CGAGAGCTAA AGGCACAGAA GCGGGCGACG GTCCGCTTCG AGACGGCGCC GGGCCATCAG
ATGCAGATCG ACTTCGGTGA CACGAAGGTG TGGATCGGCG ACGAGCGGGT TCGGATTCAC
CTGTTCGTGG GGACGCTGGG GTATTCGCGG CGGATGCATG CTCGCGCGTC ACTCAGGGAG
CGCCAGGCAG ACTGGTTTGA AGGCATGGAA GGCGCTTTCC TGCGGTTCGG CGGGGTTCCG
GTGGAAGTGC TGATCGACAA TGCGAAGGCC CTGGTCGAAC ATCATGATCC GGTGACGCGA
GAGGTGAGAT TCAACGCGCG ACTGCATGCT TTCGCCCGTT ATTGGGGCTT CACGCCGCGG
GCCTGCGCAC CGTATCGGGC GAGAACGAAA GGCAAAGACG AGCGCGGGGT CGGTTACGTC
AAGAAGAACG CGATCGCCGG GCGCCGCTTC GAGAGCTGGG CCGAGTTTGA AGCGCATCTG
GATCGATGGA CACGCGAAGT TGCCGACCAG CGTGAACACG GCACCACCGG TGTCAAACCG
GCGGAACGCT TTGCCGACGA AGCCAGGGAG CTGCGCCCGC TGGCCGGACG GGCACCCTTC
GGGCAATTGC GGGATCTGGT TCGCAAGGTT CAAGCCGATT GCGCGATCGA CCTCGACACC
AACAGCTACT CGGTGCCCTG GCGCCTGATC GGCGAGAGTG TTCAGGTCGT GGTGTTGGCG
GGGCGCGTCA TCATCCGGCA TGCGGGCCAG GTGGTGGCTG ATCATGCCCT GTGCGATGGA
CGACGACAAC GGATCGTGGA CCGGGCGCAT TTTGTCGGTG TTGCCGGCGC CGAGGGTCTG
GTGCGAGCCG CCGCTCCCAT CGAGCTCCCC CCTCCCACCC TGTTGCGCCC GCTTGCGGAA
TACGAGGCGG TTGCCGGAGG AGGCTGGTGA
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| Protein sequence | MTSAILSHPA LSLTMQGGDM LQADEVVAML RLHELGWGSK RLSKEFGCAR NTVRRYLREG
GAVPFKQPAR RSAFDGLDDW LRERFFRHDG NADVIRQELA SEHGIVIGLR SVELRVRQWR
RELKAQKRAT VRFETAPGHQ MQIDFGDTKV WIGDERVRIH LFVGTLGYSR RMHARASLRE
RQADWFEGME GAFLRFGGVP VEVLIDNAKA LVEHHDPVTR EVRFNARLHA FARYWGFTPR
ACAPYRARTK GKDERGVGYV KKNAIAGRRF ESWAEFEAHL DRWTREVADQ REHGTTGVKP
AERFADEARE LRPLAGRAPF GQLRDLVRKV QADCAIDLDT NSYSVPWRLI GESVQVVVLA
GRVIIRHAGQ VVADHALCDG RRQRIVDRAH FVGVAGAEGL VRAAAPIELP PPTLLRPLAE
YEAVAGGGW
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