Gene Smed_1695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1695 
Symbol 
ID5322553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1774297 
End bp1775124 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID640790634 
ProductABC-3 protein 
Protein accessionYP_001327366 
Protein GI150396899 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACG ATTTCTTCAT CCGCGCGCTC GTCGCGGGAA TAGGCATTGC CATGGTCGCG 
GGGCCGCTGG GTTGTTTCGT GATCTGGCGG CGCATGGCCT ATTTCGGCGA TACGATGGCG
CATTCGGCGC TGCTCGGGGT GGCACTTTCG CTGCTCATGG ACCTCAATCT TATGGTGAGC
GTCTTCGTCG TCGCCTCCGC CGTCTCGGTG CTGCTTCTCT TTCTGCAGAA GCGAGGCGCG
CTCTCGACGG ACGCGCTGCT CGGCATCCTC TCGCATTCGG CGCTGTCGAT CGGTCTGGTC
ATCGTCGCCT TCATGACCTG GGTCCGGATC GATCTCGTCG GATTCCTTTT CGGCGACATC
CTCGCGGTTT CAAGAGCCGA CATAGACATC GTATGGGGCG GCGGCATTCT GGTCGTCTTC
GCGCTCGTCT ATCTGTGGCG CCCATTGCTC GCTTCCACCG TCAACCCGGA ACTCGCCGAG
GCGGAAGGGC TCAAGCCAGA GCGAGCGCGG CTCTTCTTCA TGCTGCTCAT GGCCCTGGTG
ATAGCGATCG CGATGAAGAT CGTCGGCATC CTGCTGATCA CCTCGCTGTT GATCATACCG
GCGGCAACCG CCCGCCGCTT CTCCTCATCG CCGGAAACAA TGGCTGTGCT TGCTTCTCTC
ATCGGAGCGG TCGCCGTGGC CGGCGGGCTT TTCGGCTCGC TTCATTGGGA TACGCCGTCG
GGTCCGTCTA TCGTGGTTGC GGCGCTGGCT CTTTTCGTGC TGAGTCTGCT GCCGGTCGGT
CGCCGGATCG AGAGCGCCCC GCATTCTTCG CATGGAGGAC ATCACTGA
 
Protein sequence
MLDDFFIRAL VAGIGIAMVA GPLGCFVIWR RMAYFGDTMA HSALLGVALS LLMDLNLMVS 
VFVVASAVSV LLLFLQKRGA LSTDALLGIL SHSALSIGLV IVAFMTWVRI DLVGFLFGDI
LAVSRADIDI VWGGGILVVF ALVYLWRPLL ASTVNPELAE AEGLKPERAR LFFMLLMALV
IAIAMKIVGI LLITSLLIIP AATARRFSSS PETMAVLASL IGAVAVAGGL FGSLHWDTPS
GPSIVVAALA LFVLSLLPVG RRIESAPHSS HGGHH