Gene Smed_1693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1693 
Symbol 
ID5322551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1773342 
End bp1773872 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content60% 
IMG OID640790632 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001327364 
Protein GI150396897 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.529544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCT ACGCTCTAGG ACCGCTTAGA CCACAGACCC CGACCGAAGG CAGCTATTGG 
GTCGCACCGG ATGCCAATAT CATCGGGCAG GTCGAGATTG GCGAAGATGT CGGCATCTGG
TTCGGCGCGA CCCTGCGCGG CGACAACGAG CCGATCCGCA TCGGCGCTCG CACGAATATT
CAGGAATCCG TCGTCGTACA CGTTGACCCA GGCTTACCCG TCACCATCGG CGAAGGATGC
ACGATCGGAC ACCGTGCAAT CATTCACGGC TGCACCATAG GCGACAACTC GCTGATCGGC
ATGGGAGCGA CGGTGCTGAA TGGTGCGAAG ATCGGCCGCA ATTGCCTCGT TGGTGCCAAT
GCGCTGGTGA CCGAGGGAAA GGAATTTCCC GACAACTCAC TCATCGTCGG CGCCCCTGCC
AAAGTGGTGC GGACCCTGGA TGACGCCGCA GTTGAAGGAT TGAAGCGCTC GGCCGAACAC
TATGTGAAGA ACTGGCAGCG CTACGCTGCC CAGCTCACGC TGCTGGATTG A
 
Protein sequence
MPLYALGPLR PQTPTEGSYW VAPDANIIGQ VEIGEDVGIW FGATLRGDNE PIRIGARTNI 
QESVVVHVDP GLPVTIGEGC TIGHRAIIHG CTIGDNSLIG MGATVLNGAK IGRNCLVGAN
ALVTEGKEFP DNSLIVGAPA KVVRTLDDAA VEGLKRSAEH YVKNWQRYAA QLTLLD