Gene Smed_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1664 
Symbol 
ID5322522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1753828 
End bp1755081 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content62% 
IMG OID640790604 
Producthypothetical protein 
Protein accessionYP_001327336 
Protein GI150396869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0908123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG AAGCCACAAT CCGACGCGGT GTGCGCAATG CACGCTATGC GGCAATACCG 
AACCATGTCT TTGAGGATGC GCGGCTGTCG ATGGAAGCAA GGTGGCTCTT GAGCTACCTG
CTCTCCAAGC CAGACAACTG GACCGTCGTC ATCGGCGATA TCATCAAAAA GGGCAATTGC
GGGCGCGACA AGGCTCGCAA GATGATCGCC GAGTTGGTCG ACATTGGTTA TGCAGAGCGC
GAACAGCAGC GCGAGGACGG CAAATTCGGA GCTTCAGTGC TCGTGATCTT CGACGAGCCG
CGCTGCGCCA CGGCCGCTGA AAACGCGGCC GAAGCGTCTG GTGTTGCAAT TCTACCGCAG
ACGGATTTAC CGGCGACGGC ATTACCGGCG CCGGTTTCGC CGGCGCCGGT AAAATCGGCA
CATAGTAATA ACTCAGATTC AGCAAATACT GATTATCAGA ATCTGAGAGA GGGCGGGCGC
GATGCTCCGG AAGATGGGCA GGAGCCGGAA GATCCGAGGA AGATCGACGC TGCCTTCTGG
GCGCTGGTGA AGGATTGGCC CGGCTTCGCC GGCATGCCGA AAGAACCGGC GCGGAAAGGT
TGGTTCGCTC TGACGGCTGA CGAGCGCCGG GAAGCGTCCG AGCGCTTCGC GCGGTGGCTG
CAGCTGCTGA AGGCGCAGAA GAAATCCCAC ACCCCGGCAC CATCGACCTA CTTCGGCGAA
AAGCTCTGGA TGGATGTTCC TGCGCAGGAT GAGGCGGCGA AACCTGCGAA CGCCATGGCT
GCGCCGTTCG GCAAGCTCTG GTCGGCGACG CGGATCGCCG AGCTGCTGCT GCCGCCGTCT
GGGATCGTCG CTCCTCCGAC GAAGTTCGAA CAGATGCAGA TCGACGCCGG GCAGGTGTCG
CTTGCCGACG TGATGGCCGA GAAGCGCATG CGGGCAGGAT GGCCGTCGGT GAACAGCATG
CAGGAACGGG CACGCTCGGC GCAGGGCTCG ATGTGCCCGC TGGCGCTTGA AGAGGCGGGG
CAGGGCTTTC AGGCGGTGAA GCGTGACGGC GATCTGCTTG CCGCGTGGCA GCGTGAGCAC
AAGCGGCGCG GCTGGCCCTT TCCGGAAGGG CGCTTGCCTG AATGGGTCTA TTTCCCGGCG
CTCGAGGGCG AGGGCGATCT CGACTTCCTC GTGGCCGAAG CGGTCGAGCG CTACCGCGAA
CGAATTTTCG ATTATCTCGC GAACAGGAGC AAAGGCGATG ATCATGCAGC GTAG
 
Protein sequence
MSQEATIRRG VRNARYAAIP NHVFEDARLS MEARWLLSYL LSKPDNWTVV IGDIIKKGNC 
GRDKARKMIA ELVDIGYAER EQQREDGKFG ASVLVIFDEP RCATAAENAA EASGVAILPQ
TDLPATALPA PVSPAPVKSA HSNNSDSANT DYQNLREGGR DAPEDGQEPE DPRKIDAAFW
ALVKDWPGFA GMPKEPARKG WFALTADERR EASERFARWL QLLKAQKKSH TPAPSTYFGE
KLWMDVPAQD EAAKPANAMA APFGKLWSAT RIAELLLPPS GIVAPPTKFE QMQIDAGQVS
LADVMAEKRM RAGWPSVNSM QERARSAQGS MCPLALEEAG QGFQAVKRDG DLLAAWQREH
KRRGWPFPEG RLPEWVYFPA LEGEGDLDFL VAEAVERYRE RIFDYLANRS KGDDHAA