| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1643 |
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| Symbol | |
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| ID | 5322501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1737035 |
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| End bp | 1738156 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640790583 |
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| Product | outer membrane protease |
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| Protein accession | YP_001327315 |
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| Protein GI | 150396848 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4571] Outer membrane protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.13084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTGCG AATACTTCCA TTCCCTAAAG GCGTTGAAGC TGCCAGCCTC GCAACGGCAG
GACGACACCG GTCCCTCAAC ACCAGCGGCT TGCCAAGTGG GCAAGTCTGA CACGAAGGGG
ATCCGAGGCG AAGAAGCTCA GGCTCAAGAC GGAGGCGCTG TACGAAAGAC GCGGTCAGCT
ATGAAGCGCG TCTCCATCAG ATCCGTAGCG ATCTCCTGTT TTCTGTACGG TGCCCCATCA
TTCGCCGCCG CAGACAACGC TCTGTTTTCC TCCGACGATG GCAACGTCGT CGTTTTCGGC
GATATCGGCC TCGCCAACAT AAAGGCGCAG GAATTTTTCT ATGTCGGCGA CCACAAGATC
AGCCAGTTGA ACTGGGAGAG TAAAGGAGTC ACTCTTTTCA CGGTTGGCGT CGACGGGCAG
ATCGACAACG ACTGGAGCTT GAAGGGCAGC GTCAAAGTCG GCACCGGCGG CAATGGTCAC
CTGGTTGACT ACGACTGGAC GATCATCGAG CGCGAAGACT GGAGCGACCG CTCAATCCAC
CCGCTTACCG AACTCGATCA CTATGTCGCC GCAGCGATCG AGTTGGACCG GATCATCTAC
GGCAACGACA CCAGCAGTAT CGCGGTCGGC GCTGGTATGC GCTATACCGA CGTCAAATGG
ACCGCCTATG GCGGGTCAGG CATCTCTACG AAGAAAACGT TCCGCGATAA ACGTTGGGAA
TTGCTAGACT GGGAAAGAGG CGCAAGCTAC CGGCAAAAAA TTCCGGTGGG CTTCCTCAGC
CTGAGCGGCG AACACGTCCT CGGCGATCTT ACCATCAGCG GCGGCCTTCA GACCGGTCTG
AGCTTCGGCA TCAAGAGCAT CGACGACCAT TGGCTGCGCA ACCTGCGTTT TTCGGATGAC
ATGTCTCCGG CACCGACAAT CGGCGCCAAT GTCGCCGTCA GCTATGCGGT GACGCCCGGT
GCTTCGCTTT ATCTGTCCGG TTCGTTCGAG CGGGTGTTTC ACAGCCGCGG GGACAAGGAA
CGTCACAACT TCGCGACAGG CGAAATTGAA TTCCGCAAGG ATTATGCCGG GGCCACGTTC
GAGGCAATGT CAGTCTCCTT CGGGCTAAAG GGCACGTTTT GA
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| Protein sequence | MVCEYFHSLK ALKLPASQRQ DDTGPSTPAA CQVGKSDTKG IRGEEAQAQD GGAVRKTRSA
MKRVSIRSVA ISCFLYGAPS FAAADNALFS SDDGNVVVFG DIGLANIKAQ EFFYVGDHKI
SQLNWESKGV TLFTVGVDGQ IDNDWSLKGS VKVGTGGNGH LVDYDWTIIE REDWSDRSIH
PLTELDHYVA AAIELDRIIY GNDTSSIAVG AGMRYTDVKW TAYGGSGIST KKTFRDKRWE
LLDWERGASY RQKIPVGFLS LSGEHVLGDL TISGGLQTGL SFGIKSIDDH WLRNLRFSDD
MSPAPTIGAN VAVSYAVTPG ASLYLSGSFE RVFHSRGDKE RHNFATGEIE FRKDYAGATF
EAMSVSFGLK GTF
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