Gene Smed_1636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1636 
Symbol 
ID5322494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1729258 
End bp1730073 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content64% 
IMG OID640790576 
Productputative transmembrane protein 
Protein accessionYP_001327308 
Protein GI150396841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.112405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGAA CCGTGCCCCC CGGCGCGGCG ATCCTGCTCG ACTTCATCCG TGAAACGGAA 
GTCGGGCGGA GCGACCGCGC GTCCTATGAC GTGATCTACG GCCATAACCA GGCCAAGCTG
CCGAAACCGC TCACCGCCAT GACCTATGGT GAGATCGTCG ATGCGCAGGC GAAGTGGTCC
AAGCGGTTCG GCTCTAGCGC GGCTGGCGGC TATCAGTTCA TGCGGGCGAC GCTGATCGAT
CTTGCGAAGC AGGTCACGTC GATCAGCGGA AAAGATGTCT TCACGCCCGA TCTGCAGGAC
CGGCTCGCCT ACAAGCTGCT CGTGCGGCGC GGCTACCCGG AGTACATCGT TGGTAAGATC
AGCCTCGTCC AGTTCGCAGA AAACCTGGCG AAGGAATGGG CCTCCTTTCC GGTGCTGGTT
TCGTGCAAGG GGGCGCATCG GGTTTTGAAA CGCGGGCAGT CTTATTATGC CGGCGACGGG
CTCAACAAGG CGCTGGTGAG GCCGGAGAAG GTCGAGGCGG TGCTGCAAGA GGTGCTTGAC
GTAGCGCGCC GGCCGCACGA ACCGGTAGAG GAGCCGGAAG CTCGTCCCGT GCCTTCGCCC
GGTCCGAAGC CGAAAGCGAA GCCGGTGCGC AAGTCCGGCC GGTTCTGGAC ATGGCTGCTG
ACGGCCGGCG GCACGATCGT CACCGGGCTG AAAGAACTGA ACCTCGTCGT GCTCGACTGG
CGGGTGCAGA TCGCCATCCT CGTCGTCATC GTCGGTTTCG CTGTCTACGC GATCACTTCC
ATGCCGGCGG TGCGCGGCGC CCTGGGGCTG AAGTGA
 
Protein sequence
MDRTVPPGAA ILLDFIRETE VGRSDRASYD VIYGHNQAKL PKPLTAMTYG EIVDAQAKWS 
KRFGSSAAGG YQFMRATLID LAKQVTSISG KDVFTPDLQD RLAYKLLVRR GYPEYIVGKI
SLVQFAENLA KEWASFPVLV SCKGAHRVLK RGQSYYAGDG LNKALVRPEK VEAVLQEVLD
VARRPHEPVE EPEARPVPSP GPKPKAKPVR KSGRFWTWLL TAGGTIVTGL KELNLVVLDW
RVQIAILVVI VGFAVYAITS MPAVRGALGL K