Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1636 |
Symbol | |
ID | 5322494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1729258 |
End bp | 1730073 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640790576 |
Product | putative transmembrane protein |
Protein accession | YP_001327308 |
Protein GI | 150396841 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.112405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGAA CCGTGCCCCC CGGCGCGGCG ATCCTGCTCG ACTTCATCCG TGAAACGGAA GTCGGGCGGA GCGACCGCGC GTCCTATGAC GTGATCTACG GCCATAACCA GGCCAAGCTG CCGAAACCGC TCACCGCCAT GACCTATGGT GAGATCGTCG ATGCGCAGGC GAAGTGGTCC AAGCGGTTCG GCTCTAGCGC GGCTGGCGGC TATCAGTTCA TGCGGGCGAC GCTGATCGAT CTTGCGAAGC AGGTCACGTC GATCAGCGGA AAAGATGTCT TCACGCCCGA TCTGCAGGAC CGGCTCGCCT ACAAGCTGCT CGTGCGGCGC GGCTACCCGG AGTACATCGT TGGTAAGATC AGCCTCGTCC AGTTCGCAGA AAACCTGGCG AAGGAATGGG CCTCCTTTCC GGTGCTGGTT TCGTGCAAGG GGGCGCATCG GGTTTTGAAA CGCGGGCAGT CTTATTATGC CGGCGACGGG CTCAACAAGG CGCTGGTGAG GCCGGAGAAG GTCGAGGCGG TGCTGCAAGA GGTGCTTGAC GTAGCGCGCC GGCCGCACGA ACCGGTAGAG GAGCCGGAAG CTCGTCCCGT GCCTTCGCCC GGTCCGAAGC CGAAAGCGAA GCCGGTGCGC AAGTCCGGCC GGTTCTGGAC ATGGCTGCTG ACGGCCGGCG GCACGATCGT CACCGGGCTG AAAGAACTGA ACCTCGTCGT GCTCGACTGG CGGGTGCAGA TCGCCATCCT CGTCGTCATC GTCGGTTTCG CTGTCTACGC GATCACTTCC ATGCCGGCGG TGCGCGGCGC CCTGGGGCTG AAGTGA
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Protein sequence | MDRTVPPGAA ILLDFIRETE VGRSDRASYD VIYGHNQAKL PKPLTAMTYG EIVDAQAKWS KRFGSSAAGG YQFMRATLID LAKQVTSISG KDVFTPDLQD RLAYKLLVRR GYPEYIVGKI SLVQFAENLA KEWASFPVLV SCKGAHRVLK RGQSYYAGDG LNKALVRPEK VEAVLQEVLD VARRPHEPVE EPEARPVPSP GPKPKAKPVR KSGRFWTWLL TAGGTIVTGL KELNLVVLDW RVQIAILVVI VGFAVYAITS MPAVRGALGL K
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