Gene Smed_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1628 
Symbol 
ID5322486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1721977 
End bp1722486 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content57% 
IMG OID640790570 
Producthypothetical protein 
Protein accessionYP_001327302 
Protein GI150396835 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1936] Predicted nucleotide kinase (related to CMP and AMP kinases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.66564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0604015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCA AGAACTATCT GATCGAAGGC GGTTCCGGCA CTGGAAAGAC GTCTGTCGCT 
ACAGAACTGG AGCGGCGGGG CTACGATGTC ATCCATGGTG ATCGGGTCTT AGCTTATGTC
GGTGACCCCG AGACAGGCCA GGCACTCGCC GGACCACCCA AAGGCGCAGA CCGCGTCGCT
TGGCGATATG CGCACTGGAT CTGGCCCGTT GACAAGGTCC GCGCTATTGC TGCCGACACC
ACCCACCCTG CCACATTCTT CTGTGGCGGC TCACGCAATT CCCGAAAATT TCTGCACCTG
TTCGACAAGG TATTCGTGCT CTACATCGAC GTAGAGACGT TGAACCGAAG ATTAGATGAA
CGGCCGCATG ACTTTGGCTT TAAACGGGCC GAGCGGGCAC TGGTACTCCG CTACCATCGT
ACTCGGGAGT ATCTTCCTGC CGGCATCACC ATCGACACGG CAAATACCGT CGCACGTGTG
GTCGACGATA TCCTCGCTCA CCTCACCTGA
 
Protein sequence
MGIKNYLIEG GSGTGKTSVA TELERRGYDV IHGDRVLAYV GDPETGQALA GPPKGADRVA 
WRYAHWIWPV DKVRAIAADT THPATFFCGG SRNSRKFLHL FDKVFVLYID VETLNRRLDE
RPHDFGFKRA ERALVLRYHR TREYLPAGIT IDTANTVARV VDDILAHLT