Gene Smed_1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1615 
Symbol 
ID5322473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1709905 
End bp1710495 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content55% 
IMG OID640790559 
Producthypothetical protein 
Protein accessionYP_001327291 
Protein GI150396824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0133105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.127228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCACG TACAGCCCGA TCCAGCGATC TTTTCTCATA TTCGCGTCGT CATGGGCATG 
GTGATCAGCC TGTCGCTCGC GCGGCTCCTC AGCGGCATCG CGCTTTTCGT ACAGCATCCG
GGCAAGACGA AGGTCTACTG GATCCATCTC GGCTGGGTGC TGTTCATGTT CGTCTTCCTC
GTCCATTTTT GGTGGTGGGA ATATCACCTG CATTCGCTGG CGGTGATCGA CGTAAGCGTC
TACCTGTTCG TCATTCTTTA TTGCTGCGTC TTCTTTCTGC TCTGCGTATT CCTCTTCCCG
ACGACCCTCG ACGACTATAG CGGCTACGAA CATTATTTCA TGTCCAGGCG AGCCTGGTTC
TTTGGCTTTC TCGCCCTCGC ATTTGCTGTA GACCTCATCG ACACCGCCCT GAAGGGCAAG
GCCTATTTCC ATTCGTTCGG TGTGGAATAT CCGCTGCGCA ACGCGGCCTA TATCGCCCTC
TGCGTCATTG CCGCGGCGAC ACCGAACCGC CGTTTCCATG CAATCTTTCT GGTGGGCGCC
GTTCTCTACC AGCTCACATG GATGTATCGC GCCTTCGACC TCCTCGATTA A
 
Protein sequence
MEHVQPDPAI FSHIRVVMGM VISLSLARLL SGIALFVQHP GKTKVYWIHL GWVLFMFVFL 
VHFWWWEYHL HSLAVIDVSV YLFVILYCCV FFLLCVFLFP TTLDDYSGYE HYFMSRRAWF
FGFLALAFAV DLIDTALKGK AYFHSFGVEY PLRNAAYIAL CVIAAATPNR RFHAIFLVGA
VLYQLTWMYR AFDLLD