Gene Smed_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1612 
Symbol 
ID5322470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1706706 
End bp1707257 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content68% 
IMG OID640790556 
Productprotease inhibitor Kazal-type 
Protein accessionYP_001327288 
Protein GI150396821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0647297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.267267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGCCTT TAAAGCGTTT GATCATGAAG TCGGCCGCCC TTTTCGTGCT CGCCGCGGGG 
TTCCTTTCGG CCTGCACCGT TGTCGTCGAC GAGCGCCCCG GCCCCGGGCC GATCGGCCCG
CCGGGCCCGC AAATGTGCAC GATGGAGTTT GCGCCGGTCT GCGGCGAACG CGGCAATCGC
ACGCGGACCT TCCCCAATGC CTGCCAGGCA CGCGCAGATG GCTTCCGCAT CGTCCATCGG
GGCGAATGCC GGCCGGCCTC TCGTCCGCCG GAGGAGCAGG TCTGCACGCG TGAGTTTTCT
CCGGTTTGCG GCCAGCGCGG CCCGAGAAGG CAGACCTTCC CGAATTCGTG CATTGCGCGT
GCCGAAGGTT TCCGCGTCGT CGCCCCCGGC GAATGCCGCC GGGAGGATGA CCGCCCGCAG
CAGCCGCAGT TCTGCACGCG GGAATTCGCA CCGGTCTGCG GCCAGCGTGG CAGGGGTACG
AGAACGTTCC CGAATGCCTG CGAGGCAGGA GCGGATGGTT TCCGCGTGAT CCATCCGGGC
GAATGCCGAT AG
 
Protein sequence
MLPLKRLIMK SAALFVLAAG FLSACTVVVD ERPGPGPIGP PGPQMCTMEF APVCGERGNR 
TRTFPNACQA RADGFRIVHR GECRPASRPP EEQVCTREFS PVCGQRGPRR QTFPNSCIAR
AEGFRVVAPG ECRREDDRPQ QPQFCTREFA PVCGQRGRGT RTFPNACEAG ADGFRVIHPG
ECR