| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1611 |
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| Symbol | |
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| ID | 5322469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1705251 |
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| End bp | 1706423 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790555 |
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| Product | extensin family protein |
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| Protein accession | YP_001327287 |
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| Protein GI | 150396820 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0689957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.22002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGG CAATCAGTAT GGCGTATGTT TCTCTTCTCC ATCGTCCCCT GGCGGCGCTG
CTATTGTCCA TTCCGCTCGT TGCCTGCACC ACGGACGTGC TTGCACCCCC GGCTAGAATC
GACGGGGGCG CCCGTGTCGG CGCAATCAGC CCGGCCCCGG TTGCGATGCC GGAGCAGAAG
GTTGCTGCCT ATCCCGCTGA AGGACCCGTC GCGATAGCCA GTCAGACCTC TGTTACGCCG
GCGGCCAGCA GCGCAGTTCC GCCCGAAGGT GTGAACATGG ACGCCATGCT TGGCGTCGAA
CCTGTCGTTG GGCTGGCGCA GGAGCAGTCG CGTGAAATCG CGGAAGGGAA TACAACGCAG
CCGGTCGTGG CCGGAATCGG CGAGGGCGAT GTCCGCCAGC TTGCCGGAAC GCCGGAGCCG
GCAGCACCGG CGGTCGAGAC GAACCCCGGC TTCGATCCCG ACCTGCCGCC TCTGACACCG
GCAAAGAATT CGGCCGTGGA AGCCAAAAGT GGGCGCGCTC TCGCGCCGCA ACGGTCGGCG
CCTGCCGAGG AATCACAGCA GGTCGCTTTC ATACCCCGCG CCCGCAGCCC GCTTTCCGCG
CCGTCACATG CCGGCGCAAT GCCGGGTCCG GAGGTCGCCT GCCGGCAACG GTTGAAACAG
CTCGGCGTCA TATTCCGTGA CGTACCGCAA ATCTACAACG GACCGTCCTG CGGTATCGAT
TACCCGATCG AACTCAGCGG CCTTTCCGGC GATATCGCCG TCAAGCCCGC GGTGAAGCTC
AACTGCCAGG TGACCGAAGC ATTCGCCAAA TGGGTGAAGT ACGAGCTCGC GCCATCGTCG
CGCTACCGTT ACTGGTCGGG AGTGAAGACG ATCAAGCCGC TCGGCGGCTA TTCCTGCCGG
ACGATGAACT CCCGGCGCGG TAATCCCATG TCGGAACATT CGCGCGGAAA TGCGATCGAT
GTCGGCAAAT TCGTGCTGAA GAACGGCAAG GAAATCGATG TCCGCCGGAA AGGTCTCTTC
GCCTTTCGCG AGAGGGGCCT GTTGAAGGCC GTACGCTCCG ATAGCTGCAA GTATTTCAAT
ACGGTCCTTG GTCCTGGAAG CGATCCTTTC CACAAGGATC ATTTCCACTT CGATTTAAGG
ACGCGCAAAA CCGGTTACCG GCATTGCGAC TAG
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| Protein sequence | MKAAISMAYV SLLHRPLAAL LLSIPLVACT TDVLAPPARI DGGARVGAIS PAPVAMPEQK
VAAYPAEGPV AIASQTSVTP AASSAVPPEG VNMDAMLGVE PVVGLAQEQS REIAEGNTTQ
PVVAGIGEGD VRQLAGTPEP AAPAVETNPG FDPDLPPLTP AKNSAVEAKS GRALAPQRSA
PAEESQQVAF IPRARSPLSA PSHAGAMPGP EVACRQRLKQ LGVIFRDVPQ IYNGPSCGID
YPIELSGLSG DIAVKPAVKL NCQVTEAFAK WVKYELAPSS RYRYWSGVKT IKPLGGYSCR
TMNSRRGNPM SEHSRGNAID VGKFVLKNGK EIDVRRKGLF AFRERGLLKA VRSDSCKYFN
TVLGPGSDPF HKDHFHFDLR TRKTGYRHCD
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