| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1606 |
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| Symbol | |
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| ID | 5322464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1701289 |
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| End bp | 1701990 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790550 |
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| Product | putative transmembrane signal peptide protein |
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| Protein accession | YP_001327282 |
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| Protein GI | 150396815 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.284627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.150765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGC TGATTCTCCT CCTGGCAATT CTCGGCATCG GCCTCGTGCT CCTGATCCTC
AATCACGATT CCGGCCGGAC GTTCGGCATG AACAATGACG ATTTCGGGCA GCTCGTGGCT
CTCGGCGCCC TTGCCACGCT TTTTGCGGCC GGCATTGTCA GAAGCCGCCG CACGCTCGGC
GAGGGATTGA CCCAGATTGC GATCTGGATC CTGATCGCGG TGGTTCTGGT TGGGATTTAC
GTCTACCGGT TTGACCTTCG GTCCGTTGGC GAACGGGTGC TGGCCGGCCT TATGCCTGGC
CGCGCGATGG TCATCACCGA CAGCGAGGGC CAGCAGGAGG TGGTGCTTCA CAAGCGGATC
GACGGCCACT TCGCCGCAGA TGCGACGATC AACGGGCACG ACGTCAGCAT GCTTGTAGAC
ACCGGCGCGA GCAGCATCGT GCTTACCCAT GAAGACGCTG CGAAGGTCGG TATCGACGTC
GCAGGTCTCG GCTACACGAT AACTGTCATG ACCGCGAACG GACCGGCGCT CGCCGCCCCG
GTCACCCTGC CGGAGATCGC CATAGGGCCG ATCCGGCGGA CGAATATTCG CGGCATGGTC
GCGGCCGAAG GGCGGCTTGA CAGCAGCCTG CTCGGCATGA GTTTTCTGTC GACGCTCGAT
TTCCTGCAGA TGCGCAGCGA CGAACTGCCG CTCAGGGATT AG
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| Protein sequence | MNRLILLLAI LGIGLVLLIL NHDSGRTFGM NNDDFGQLVA LGALATLFAA GIVRSRRTLG
EGLTQIAIWI LIAVVLVGIY VYRFDLRSVG ERVLAGLMPG RAMVITDSEG QQEVVLHKRI
DGHFAADATI NGHDVSMLVD TGASSIVLTH EDAAKVGIDV AGLGYTITVM TANGPALAAP
VTLPEIAIGP IRRTNIRGMV AAEGRLDSSL LGMSFLSTLD FLQMRSDELP LRD
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