Gene Smed_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1602 
Symbol 
ID5322460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1698534 
End bp1699016 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content60% 
IMG OID640790546 
Productdiacylglycerol kinase 
Protein accessionYP_001327278 
Protein GI150396811 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0818] Diacylglycerol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.369431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCGC CTTGGATTCG CCTTAATCGG AACGTCGAAG CTGTTCGCTT TCTCAACTCG 
CGAGACGAAA TGGACGCCAA GAACACCAAC CCCCGCAAAG GCGCTGCCGG GCCGGTTACC
AAGCATACCG GATTTCGGCA CCTGTTTGCT GCGGCCAGCT ACTCCTTCGG CGGTGCCAGG
CGTCTGATCG GAGAGGCGGC ATTCCGCCAC GAACTCATCG CCTTTGCCGT CGCGATGGCC
GCGTTCGCGA CCGTCGGCGC GAACCTGTTC CAATATGTCG CCATGGCGAT CCTGTTTCTG
CTGATGATGG CCTTCGAAGC GATTAATACC GCGATTGAGG AGATCGTCGA TCGCGTCTCG
CCGGAGATCT CCGAGATGGG CAGGAACGCC AAGGATCTCG GCTCCTTCGC CTGCCTCTGC
CTCATTCTCG CCAATGCGGG CTATGCCGTT TACGTGATAT TTCTCGCCCG GTTGCTAGGC
TGA
 
Protein sequence
MVPPWIRLNR NVEAVRFLNS RDEMDAKNTN PRKGAAGPVT KHTGFRHLFA AASYSFGGAR 
RLIGEAAFRH ELIAFAVAMA AFATVGANLF QYVAMAILFL LMMAFEAINT AIEEIVDRVS
PEISEMGRNA KDLGSFACLC LILANAGYAV YVIFLARLLG