Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1595 |
Symbol | |
ID | 5322453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1692037 |
End bp | 1692906 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790539 |
Product | 6-phosphogluconate dehydrogenase NAD-binding |
Protein accession | YP_001327271 |
Protein GI | 150396804 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.641572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAAAG TCGCATTCAT CGGTCTCGGC GTAATGGGAT ACCCGATGGC GGGTCACCTC AAGGCGCGCG GCGGTCATGA TGTCACGGTC TACAACCGGA CCGCGGCCAA GGCGGAGCAA TGGGCCGCGC AATTCGGCGG CCGGACCGCT GCAACGCCGG CCGAAGCGGC CAAGGGCCAG GAGTTCGTCT TCGCCTGCGT CGGCAATGAC GACGATCTTC GTTCCGTTAC CACGGGTGAA AACGGCGCCT TCGAAACGAT CACCCCCGGC ACGATCTTCA TCGACAATAC GACCGCATCG GCCGAGGTTG CGCGCGAGCT CTCTGCGGCG GCGGCTGCGA AAGGCGCGCA TTTCATCGAC GCACCGGTCT CCGGAGGCCA GGCAGGCGCG GAGAACGGTG TGCTCACCGT CATGTGCGGC GGCGACGTGG AAGCGTTCGA GAAGGCAAAA TCCGTTATCG ATGCCTATGC GCGGATGGTC GGTTTGATGG GTCCGGCGGG TGCCGGTCAA CTCACCAAGA TGATCAATCA GATTTGTATC GCGGGCCTCG TTCAGGGGCT CGCAGAGGGA ATTCACTTCG GCAAGAAGGC GGGACTCGAC ATCGAAAAGG TGATCGAGGT GATCTCCAAG GGAGCGGCCG GATCCTGGCA GATGGAAAAT CGCCACAAGA CCATGAACGA AGGCAAATAT GACTTCGGCT TTGCGGTCGA CTGGATGCGC AAGGATCTCG ACATCGTCCT TGCCGAGGCG CGGCGTAATG GCGCCAAGCT GCCGGTGACC GCCCTGGTTG ATCAATTCTA CGGTGATATC CAGGCGCTTG GTGGCAATCG CTGGGATACG TCTTCCCTGC TTGCCCGCCT CGAAAAATGA
|
Protein sequence | MAKVAFIGLG VMGYPMAGHL KARGGHDVTV YNRTAAKAEQ WAAQFGGRTA ATPAEAAKGQ EFVFACVGND DDLRSVTTGE NGAFETITPG TIFIDNTTAS AEVARELSAA AAAKGAHFID APVSGGQAGA ENGVLTVMCG GDVEAFEKAK SVIDAYARMV GLMGPAGAGQ LTKMINQICI AGLVQGLAEG IHFGKKAGLD IEKVIEVISK GAAGSWQMEN RHKTMNEGKY DFGFAVDWMR KDLDIVLAEA RRNGAKLPVT ALVDQFYGDI QALGGNRWDT SSLLARLEK
|
| |