Gene Smed_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1595 
Symbol 
ID5322453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1692037 
End bp1692906 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content61% 
IMG OID640790539 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_001327271 
Protein GI150396804 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.641572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAG TCGCATTCAT CGGTCTCGGC GTAATGGGAT ACCCGATGGC GGGTCACCTC 
AAGGCGCGCG GCGGTCATGA TGTCACGGTC TACAACCGGA CCGCGGCCAA GGCGGAGCAA
TGGGCCGCGC AATTCGGCGG CCGGACCGCT GCAACGCCGG CCGAAGCGGC CAAGGGCCAG
GAGTTCGTCT TCGCCTGCGT CGGCAATGAC GACGATCTTC GTTCCGTTAC CACGGGTGAA
AACGGCGCCT TCGAAACGAT CACCCCCGGC ACGATCTTCA TCGACAATAC GACCGCATCG
GCCGAGGTTG CGCGCGAGCT CTCTGCGGCG GCGGCTGCGA AAGGCGCGCA TTTCATCGAC
GCACCGGTCT CCGGAGGCCA GGCAGGCGCG GAGAACGGTG TGCTCACCGT CATGTGCGGC
GGCGACGTGG AAGCGTTCGA GAAGGCAAAA TCCGTTATCG ATGCCTATGC GCGGATGGTC
GGTTTGATGG GTCCGGCGGG TGCCGGTCAA CTCACCAAGA TGATCAATCA GATTTGTATC
GCGGGCCTCG TTCAGGGGCT CGCAGAGGGA ATTCACTTCG GCAAGAAGGC GGGACTCGAC
ATCGAAAAGG TGATCGAGGT GATCTCCAAG GGAGCGGCCG GATCCTGGCA GATGGAAAAT
CGCCACAAGA CCATGAACGA AGGCAAATAT GACTTCGGCT TTGCGGTCGA CTGGATGCGC
AAGGATCTCG ACATCGTCCT TGCCGAGGCG CGGCGTAATG GCGCCAAGCT GCCGGTGACC
GCCCTGGTTG ATCAATTCTA CGGTGATATC CAGGCGCTTG GTGGCAATCG CTGGGATACG
TCTTCCCTGC TTGCCCGCCT CGAAAAATGA
 
Protein sequence
MAKVAFIGLG VMGYPMAGHL KARGGHDVTV YNRTAAKAEQ WAAQFGGRTA ATPAEAAKGQ 
EFVFACVGND DDLRSVTTGE NGAFETITPG TIFIDNTTAS AEVARELSAA AAAKGAHFID
APVSGGQAGA ENGVLTVMCG GDVEAFEKAK SVIDAYARMV GLMGPAGAGQ LTKMINQICI
AGLVQGLAEG IHFGKKAGLD IEKVIEVISK GAAGSWQMEN RHKTMNEGKY DFGFAVDWMR
KDLDIVLAEA RRNGAKLPVT ALVDQFYGDI QALGGNRWDT SSLLARLEK