| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1592 |
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| Symbol | |
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| ID | 5322450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1689350 |
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| End bp | 1690054 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790536 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001327268 |
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| Protein GI | 150396801 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC AGAAGGTGGC AATCGTTACG GCCGGCGGTT CCGGTATGGG GGCCGGCGCG
GCACGGCGGA TGGCGGCGGA GGGCTACAAG GTCGCCGTCC TCTCATCGTC GGGCAAGGGC
GAGGCGCTCG CCAGGGAGCT CGGCGGTATC GGCGTCACCG GATCGAACCA GTCAAGTGAC
GATTTGAAGC GGCTCGTCGA TGCGGCGTAT GACGCCTGGG GTCGTGTGGA CGCCCTGATC
AATTCGGCAG GACATGGCCC TCGCGCGCCC GTACTCGAGC TCACTGACGA GGAGTGGCAC
AAAGGCATGG AGGTCTATTT CCTCAATGTC GTGCGGCCGA CCCGGCTGGT GACGCCGATT
ATGATGGAGC AGAAATCCGG CAGCATCGTC AATATTTCCA CCTATGCCAC CTTCGAACCG
GACCCCCTGT TTCCGACGTC GGGGGTCTTC CGTTCCGGAC TTGCCGCTTT CACCAAGCTT
TTCGCCGACC GCTATGCCCC CGACAATATC CGCATGAACA ATGTTCTGCC GGGCTTTATC
GACAGTCTGC CGGAAACCGA GGAACGGCGC CAGCGCATCC CGATAGGGCG TTACGGGACA
ACGGAGGAGG TGGCCGAGCT GGTTGCGCTG CTCGCCAGCG ATCGTGGGGG TTACATCACC
GGTCAAAACA TCCGGGTCGA CGGTGGCATC ACCCGATCCG TCTGA
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| Protein sequence | MSEQKVAIVT AGGSGMGAGA ARRMAAEGYK VAVLSSSGKG EALARELGGI GVTGSNQSSD
DLKRLVDAAY DAWGRVDALI NSAGHGPRAP VLELTDEEWH KGMEVYFLNV VRPTRLVTPI
MMEQKSGSIV NISTYATFEP DPLFPTSGVF RSGLAAFTKL FADRYAPDNI RMNNVLPGFI
DSLPETEERR QRIPIGRYGT TEEVAELVAL LASDRGGYIT GQNIRVDGGI TRSV
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